Gene Hmuk_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0861 
Symbol 
ID8410376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp833366 
End bp834529 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID645019197 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003176699 
Protein GI257386926 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.605059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA CCGGCGCGAT CTTGATGATC CGTGGGCCGG TGATCCCGGA GTTGCGAACC 
GCCTTCGACG CGCCCGCGTG GCAGGTCGGT CTGATCAGTA CCGCCGGCAC CGCCGGCTAC
CTGGTCGTCG TCTCGATCGT CGGCTTCGGG GCCGGCCACC TGAAGCCCCA CCGGTTGATC
GTGGGCGGGC TGCTGGGCAG CGCGCTCTCG CTACTGGCGA TGGGTGCGGC CCCGCTGCTG
GCGGTGTTTC TCGTCGGCAC GCTCGTGCGC GGAACGATGA ACGGTGTGCT CAGAGGACTG
AATCGGCCGA TACTCAGCCA CTTCTACCCG GAGAGCCGCG GCCGGATGTA CAGCTACTAC
GACATGACCT GGGCCGCCGG TGCGATGGTC GGACCGATCG GCGTCGTCGC CGTCCTCGCA
GTGGCCGACT GGCGGCTGGC CTACTACGGG CTGGCCGTCG GGATGGCACT GCTCGCCGTC
GTCGTCTGGC GGCTCGACGC TCCCGCGGTG ACGGGAACCG AGGAGCCGTT CGACCGTCGG
GAACTGCTGG CGCTGCTTCG CAGGCCCGAG ATCGCCGCGA TGATCGTGGT GATGTTTCTG
GGGACCGGCG TCGAGGGCGG ACTCTTCCTC TGGTTGCCGA CCTACGTGGA CAGCGTCGTG
CCGACCGGCG TCGCCGGCCT CGGCCTCTCG GCGGCGGCGC TGTCGTCGCT GTCGCTGTCG
GTGATGATCG CCGGCTACGT CCCCGGTCGC CTCCTCTATG GCCGCCTCTC GGAGCGAGTG
GGCTACCTCA AGATCCTCAT CGGGATCCTC GCGCTCCTGG TCCCGACGTT CTACGCGACG
TTCGTCCTCG CGACGGGACT GTGGCTCCTC CCCGGCGTCG TCGTCATCGG CGCGCTCATC
TCCGGCATCT TCCCGATGCT CGTCTCCTAC GCCACCGACG CCGTCCCCCG CCACAGCGGC
CCCGTGACCG CCGTCGCCGC CATCTCCTCG TCGCTGGGCG TCGGCATCGC GCCCGCCGTG
ATGGGGTGGG TCATCAGCGG CTCGGACCCC GGCGCGGCAA TGCGACTCCT GCTCGTGCCC
CTCGTGGCCG CCCTCGCCGT GGTACTCCTC GCGCGAGTGG CCGAGCAACG GCGCGAACGG
GCGGGCCTCT CCGTGGCCGA CTGA
 
Protein sequence
MALTGAILMI RGPVIPELRT AFDAPAWQVG LISTAGTAGY LVVVSIVGFG AGHLKPHRLI 
VGGLLGSALS LLAMGAAPLL AVFLVGTLVR GTMNGVLRGL NRPILSHFYP ESRGRMYSYY
DMTWAAGAMV GPIGVVAVLA VADWRLAYYG LAVGMALLAV VVWRLDAPAV TGTEEPFDRR
ELLALLRRPE IAAMIVVMFL GTGVEGGLFL WLPTYVDSVV PTGVAGLGLS AAALSSLSLS
VMIAGYVPGR LLYGRLSERV GYLKILIGIL ALLVPTFYAT FVLATGLWLL PGVVVIGALI
SGIFPMLVSY ATDAVPRHSG PVTAVAAISS SLGVGIAPAV MGWVISGSDP GAAMRLLLVP
LVAALAVVLL ARVAEQRRER AGLSVAD