| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0860 |
|---|
| Symbol | |
|---|
| ID | 8410375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 832122 |
|---|
| End bp | 833195 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645019196 |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_003176698 |
|---|
| Protein GI | 257386925 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1378] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.433281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGAAA GCCAGATCAG GGAGACGCTG TCGGCCTTCG GACTCTCGAC GAAGGAGGTC
GACGCCTACC TGGTAATTCT ACAGCGGGGG GAAGCGACGA CCCGGGCCGT CTCGGAGGCC
GCGGGCGTCT CACAGAGTTA CGTCTACGAG ATCGCGACCG CACTGGCCGA ACGCGGACTG
GTCATCGTCG ACGAGAGCGC GACGCCGACG AAGCTCCGCG CCCGACCACC CCAGGAGGCC
GTCGACGCGC TGACGATGCA CCTCTCGGAG TTCGAGACCG CCGTCGAGAG CGTGTACGAT
CAGCCGGCCG AGACGGCCGC GGGGTTCGAG GTCGTCCACG CCAGCCAGAC CGTCGAGCGC
CGCCTCGAAC GCCAACTGGC GCGTGCGGAG CGAGAGGTCT TCGCGATCGT CCCGTCGAAC
GCCTTTCCCA CCGTCGCCGA CGCGCTCGCC GACGCCCGGG AGCGGGGACT GACCGTCTAC
TGTCTGCTGG CCGGCGAGTC CGCGGAGTCG CACGTCGCCG AGATGGACGA CCCCGGTCGG
TACGCACACG TCGTCCGGAG CTGGGACGGC CGCCCGCCGC TGTTCGTCGT TCGGGACGCG
CTGGGGGGCG TGCTGGCTTC GCACGGGATG CTCACCAGTC GCCACGGCCG GGGCTACGCG
CTCGCGTTCA ACCAGAACGA GGTCGCCTCT GGCTTTTTCG GCAACTACGT CAGCAACGTC
TGGCCCATGG GCGAACAGCG CTTCGTCGCC GAACCACCGA CGCTGCCGGC GACCTTCGAG
CTGTTTCGCT CGGGCGTGAC GACCGCGGCC CTCCACACGA CGGCGGGCCA CGACGTCGTC
GCCGACCTCG ACGTGGTCGC CACCACCGAC GAGACGGCCC GCCAGTTCGA GGGCGTCCCG
ATCCGCGAGG TGCGCCAGAA CCTCGTCGAA CCGGTGAACA ACGCCTTCCC CATCGAGAAC
TCGCTGGTCG TCGAGACCGA CGACGGACTG GTCAGCGTCG GCGGCCAGGC CTGCGGTCTG
GGACCGTACT ACGAGGAGTA CGCCGCCCGC GAAGTGACGA TCAGGGACGC CTGA
|
|---|
| Protein sequence | MGESQIRETL SAFGLSTKEV DAYLVILQRG EATTRAVSEA AGVSQSYVYE IATALAERGL
VIVDESATPT KLRARPPQEA VDALTMHLSE FETAVESVYD QPAETAAGFE VVHASQTVER
RLERQLARAE REVFAIVPSN AFPTVADALA DARERGLTVY CLLAGESAES HVAEMDDPGR
YAHVVRSWDG RPPLFVVRDA LGGVLASHGM LTSRHGRGYA LAFNQNEVAS GFFGNYVSNV
WPMGEQRFVA EPPTLPATFE LFRSGVTTAA LHTTAGHDVV ADLDVVATTD ETARQFEGVP
IREVRQNLVE PVNNAFPIEN SLVVETDDGL VSVGGQACGL GPYYEEYAAR EVTIRDA
|
|---|
| |