| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0823 |
|---|
| Symbol | |
|---|
| ID | 8410337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 793918 |
|---|
| End bp | 796137 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645019158 |
|---|
| Product | DEAD_2 domain protein |
|---|
| Protein accession | YP_003176661 |
|---|
| Protein GI | 257386888 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACGA CCGACGACGA CTATCTGCGT TTCTTCCCCT ACGAGGAGCC CTACGACCAC
CAGCGCGAGG CGATGGGCGG CATCTACGAC GCGCTGACCG ACGGTCGTGA CGTGCTCTTC
GAGGGGGCCT GCGGGACCGG CAAGACGCTG GCCTCGCTCG TGCCGGCACT GGAGTACGCC
CGGCAGGCAG ACAAGACCGT CGTCATCACG ACCAACGTCC ACCAGCAGAT GCGTCAGTTC
GTCGAGGACG CCCGAGCGAT CACCGCTCAG GAGTCGATCC GTGCGGTCGT CTTCCGTGGC
AAGGGGTCGA TGTGTCACAT CGACGTCGAC TACGAGGAGT GTCAGGCGCT CCGCGATACC
ACCCGTGACC TGGTGGACAA AGAACGCGAA CGGGCCGAGC TGGAACGCCA GGAGAGCGAG
CTGCTCGACC AGGCCACCGA AGGCCCCAGC GACGGCGAGA ACCAGGAGAA CGCGCTAGAG
GCCCGCAACG CCGTCATGGA CGAACTCCAG GCGGTCGAAG AAGACCTCGA AGAGCTACAG
ACGGACGCGA CGATCTGCGA TCACTACTAC CGGAACCTCA CCGTGGACAC GACCGAGTTC
TACGCCTGGC TGTACGAGGA CGTTCGCACG CCCGACGACG TGTACGAGTA CGCCCACGAC
CGCGGGCTCT GTGGCTACGA ACTGCTCAAG GAGGGCGTCG AGGGCGTCGA TCTGGTCGTC
TGTAACTACC ACCACCTGCT CGATCCGATG ATCCGCGAAC AGTTCTTTCG GTGGCTCGGC
CGGGACCCGG AGGACGTGGT CGCCGTCTTC GACGAGGCCC ACAACGTCGA GAACGCCGCC
CGCGACCACG CTCGTCGGAC CCTCACCGAG ACGACCGTCG AGAGCGCCAT CGACGAACTG
GCCGAGAGCG AGGAGACGGC GGCCGGTTCG GGCGGCGAAG GCGCGAGAAG CGAGGCCGCT
CACAACGTGC TCGCGACCTT CCTTCGGGCA CTGCGGACGA CCTACGACGA GGCGTTCGGC
TTCGGCGAGC GCGAGCAGGT CGAGGACCAC TGGTACGACC TCTCGATCGC CAACGACGAC
CGCCGAGACG AACTGACACT CGCTTTCCTC CAGGAGTACA GCGGCCCCGG CTTCCACGAG
GAACTCGACC AGGCGCTGGA ACTGGGCCGA GAGCTGGACC AGCAGTACGA GGAGGCGTTC
AAGGAGGGCG ACCTCGATAC GCGCAAGGAG TGTCAGACCC TGCAGGCGGC CCAGTTCCTC
TCGGCGTGGC TCGAAGAGAG CGACGACCTC GGACAGTACC CCGTGGTGAG TGTCCGACGC
CGGGAAGAGA GTGGCGACAT CTACGGTCGG GCGGAGCTGT ACACCTGCAT CCCCTCGAAC
GTGACCGGGG ACCTCTTCTC GGATCTGCAC GCGTCGGTGC TGATGAGCGC GACGCTGCGA
CCCTTCGACG TGACCCAGGA CGTGCTCGGA CTGACCGACG CCGAGGCGAT GGCCTACGGC
GAGCAGTTCC CCGAAGAACG CAGACGGACC TACGCCGTCG ACGGCCCCGC GCTGTTTTCC
AGCGAACGCG ACGATCCGTC GACCCAGGAC GCCGTCGCTG GCGTGCTGGA AGACGCCGCC
CAGATGACGC CCGGGAACAC GCTCGCCTTC TTCCCGAGCT ACGCCGAGGC CGAACGATAC
CACGAGCGAG TCGACGTAGA CGGGAAGCAG TACCTCGACG AGCCCGGAAC GCAGGCCCGC
GACCTCAGAG ACTCGTTCGT CGACCGGGAC GACGCGCTCC TGTGTACGTC GCTGTGGGGC
ACGCTCGGCG AGGGCGTGAG CTACGACGGC GACGACGCCC GGACCGTCGT CGTGGTCGGC
GTCCCCTACC CCCACCTCGA CGACCGGATG GACGCCGTCC AGAACGCCTA CGCGATGAGT
TTCGGCGACG ACGAGGAGGC GGGCTGGCAC TACGCCGTCG AGATCCCGAC GATCCGCAAG
ACCCGGCAAG CGCTTGGCCG CGTGGTCCGC TCGCCCGAGG ACTTCGGCGT CCGCATCCTG
CTGGATCGGC GCTACACCGA GGCCGCCGAG ATGGAGATGC ACGACTACGC GGTGCGGGGA
ACCTTCCCGC CGGAGGAGCG CGCGGAGATG ATCGACATCG ACCCAGAGAA GCTCAAGTTC
GCGATGCTGA ACTTCTACCA GGACGTGGAC GGCTACGACG GGCCGCCGCC GACGCCGTAG
|
|---|
| Protein sequence | MATTDDDYLR FFPYEEPYDH QREAMGGIYD ALTDGRDVLF EGACGTGKTL ASLVPALEYA
RQADKTVVIT TNVHQQMRQF VEDARAITAQ ESIRAVVFRG KGSMCHIDVD YEECQALRDT
TRDLVDKERE RAELERQESE LLDQATEGPS DGENQENALE ARNAVMDELQ AVEEDLEELQ
TDATICDHYY RNLTVDTTEF YAWLYEDVRT PDDVYEYAHD RGLCGYELLK EGVEGVDLVV
CNYHHLLDPM IREQFFRWLG RDPEDVVAVF DEAHNVENAA RDHARRTLTE TTVESAIDEL
AESEETAAGS GGEGARSEAA HNVLATFLRA LRTTYDEAFG FGEREQVEDH WYDLSIANDD
RRDELTLAFL QEYSGPGFHE ELDQALELGR ELDQQYEEAF KEGDLDTRKE CQTLQAAQFL
SAWLEESDDL GQYPVVSVRR REESGDIYGR AELYTCIPSN VTGDLFSDLH ASVLMSATLR
PFDVTQDVLG LTDAEAMAYG EQFPEERRRT YAVDGPALFS SERDDPSTQD AVAGVLEDAA
QMTPGNTLAF FPSYAEAERY HERVDVDGKQ YLDEPGTQAR DLRDSFVDRD DALLCTSLWG
TLGEGVSYDG DDARTVVVVG VPYPHLDDRM DAVQNAYAMS FGDDEEAGWH YAVEIPTIRK
TRQALGRVVR SPEDFGVRIL LDRRYTEAAE MEMHDYAVRG TFPPEERAEM IDIDPEKLKF
AMLNFYQDVD GYDGPPPTP
|
|---|
| |