| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0784 |
|---|
| Symbol | |
|---|
| ID | 8410298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 756786 |
|---|
| End bp | 758702 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645019119 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003176622 |
|---|
| Protein GI | 257386849 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.433281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA GAACGACCAG ACGGGGGCTC CTCGGATCGA TCGGGGCCGC GTGCGCGGCG
AGCGCTGCTG GCGACGTCGT CGGAGCGAGT GGTACCGCGA CGACGCAACG CAGACGTCGA
GCGGAGACGA CGCAAAACGG TGCGGCGTTC GTAGACGACA CCGTCGAGCG ACTGCTATCC
GAACTCGACA TCGACGGCGC CGCCGTGTCG CTGGTCACGG GGGCGGGCGA GACGATCGCC
CGCGGCTATG GCCAGGCGTA CCGGTCGCCC GACACACCGA TGGATCCGTC ACAGACGCTT
GTCGAAATCG GCTCGATCTC GAAGGCGATC ACCTGGACGG CGCTGATGCA ACTGGTCGAC
CGTGGACGTA TCGCGGTCGA CGACGCCGTC GCTGATCACC TCACGTCCGT CACAGTTCCA
CAGCACCACG GGCAGGTGAA GCTGTGGCAC CTCCCGACCC ACACGCCAGG CTTCGAGGCT
CGAGTCAGGG GTGACAAGGT CGGTGACCCT ACCGACGTGC GTCCGTTGGC CGAGTCGGTC
CGCCACCCGA CACCAGCTCA GGTCCGGCCA CCGGGCGAGA TGATGGTGTA CACGAACTGG
GCTGCGGCTG TGGCCGGGCA ACTCGTATCC GACGTAACGG GAGACTCGTT CCCCGAGTAC
GTCGACAGAC AGGTCTTCGA ACCGCTCGGT ATGACCGAGA GCACGTTCGA GACGGCGCCG
GCCGCCCTCG TTCCGGGCGA ACCCGGGAGC GCTGACGACC TCAGCTGGTA CTCTGATGTC
CCGCCTGCGT CAGGGATGTG CTCGACTGCG GCGGATATGG GACGGTTCCT GCACGCCCAC
CTGCACCACG GGGACGCGAG CGAACCGATC ATGTCGTCGG GAGCCTACGA CGACATGCAT
CAGGAGTGGT TCAGTCCCCA CGAGCGAATC CGCGGTATGG CGTTTGGGTT TGCGGAAAGC
AGCCGCGGCG ACACTCGTCT CCTCGAACAT GGCGGGTCGA CCCCGCGGTT CTCGAGCAAG
ATCGTGTTCG CGCCAGCGCT CGGGGTCGGA CTCTTCGTCT CCGCTCACGG TCGGGAATCG
CCAGCGGCCG TTAATGCCGT CGAGGACGCG TTTCTCGACC GCTTCGTCGG CAGCGATACC
GATACCGAAC CTCCGGGCGA GCGTCCGCAG TCGGGGGAAC AGCAGGCACC TGCGGGACAG
TTCCGGCCGG TGTACGTGAC CGACTCGACG ACCTACGACA AAGTGTTGTG GACGGCCACG
ACCCAGTCGC TTGACGTGAC GATCGGAACC GACGGAAAGA TGATCACGAC AATAGGCAGC
ACAGAGCACG AGTGGATACA GATCGAGCCC GATCTGTACC AGCGCTCCGA CGGCGGCGAC
ACGCTGCTCC TTGAGAGCAC CGAGGACGGC ACCGAGTACA TCATCTTGGA GAGTCGGATG
GTCGTACCGT ACGAACGGGT CTCGTGGATC GAGCAGTACG ACGTTCAGAT TGCGACGGCT
GCTGTCGCCA TGCTCGTCAG TCTCCTGAGC ATCCTCCGAC TGTCCGCTCA GTCTGTGCGC
GGCGTGTTCG AGACCGATCC GGACCGGACG TGGTCTTCCC GTCCAAGGTG GGCGGAAGCC
GTCTCCGCTG GCTGGCCGTT CGCATTCGTG CTCACGCTCG TCTCCACGCT CGTCGCCGCC
AGTGCCGTGA CCGGGATATC CGTCGGCGAT CGAGCACCTC CCGGGATACA GGTCCCGCTC
TCGATCCCGT TGATCGGTGC GATCGGGACG GTCGTCGCAG TCGCATACGC GGCCCATGCG
TGGCGGGAGT CACGATGGTC GCTCGCGGAC AGACTGCGCT ACTCGGGGGT CGTCGCGTCA
TCGACTGTGC TCCTATGGCT CTGTGACTAC TGGAACCTGG TCGGCGTTGT GGTCTGA
|
|---|
| Protein sequence | MNTRTTRRGL LGSIGAACAA SAAGDVVGAS GTATTQRRRR AETTQNGAAF VDDTVERLLS
ELDIDGAAVS LVTGAGETIA RGYGQAYRSP DTPMDPSQTL VEIGSISKAI TWTALMQLVD
RGRIAVDDAV ADHLTSVTVP QHHGQVKLWH LPTHTPGFEA RVRGDKVGDP TDVRPLAESV
RHPTPAQVRP PGEMMVYTNW AAAVAGQLVS DVTGDSFPEY VDRQVFEPLG MTESTFETAP
AALVPGEPGS ADDLSWYSDV PPASGMCSTA ADMGRFLHAH LHHGDASEPI MSSGAYDDMH
QEWFSPHERI RGMAFGFAES SRGDTRLLEH GGSTPRFSSK IVFAPALGVG LFVSAHGRES
PAAVNAVEDA FLDRFVGSDT DTEPPGERPQ SGEQQAPAGQ FRPVYVTDST TYDKVLWTAT
TQSLDVTIGT DGKMITTIGS TEHEWIQIEP DLYQRSDGGD TLLLESTEDG TEYIILESRM
VVPYERVSWI EQYDVQIATA AVAMLVSLLS ILRLSAQSVR GVFETDPDRT WSSRPRWAEA
VSAGWPFAFV LTLVSTLVAA SAVTGISVGD RAPPGIQVPL SIPLIGAIGT VVAVAYAAHA
WRESRWSLAD RLRYSGVVAS STVLLWLCDY WNLVGVVV
|
|---|
| |