| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0546 |
|---|
| Symbol | |
|---|
| ID | 8410049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 519589 |
|---|
| End bp | 520578 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645018873 |
|---|
| Product | GTP-binding protein HSR1-related |
|---|
| Protein accession | YP_003176387 |
|---|
| Protein GI | 257386614 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1084] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.879675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATC CCTTCGAGGA TCTTCCGACG ACGCCGACCG CCGAGGAAGT CATCGACAAG
GCCTTCTCTC GGGCTGCCCG CGCCGGCAAG GCGAAGACCG GGATCGAGGG CCAGCAGTCG
ATGCTCCAGA CGGCGTCGAA CATCGTCTCG GACAACCTCC AGAACGTCGT CACTGCGTGG
CCGGACATCG ACACGCTCGA TCCGTTCTAC GTCGAACTCG CCGACGCGAT CATCACCAGC
AACGTCGAGG GCGAGGGCGG CATCGACGCC CTTCGACAGC ACCTCTCGGA GGTTCAGTGG
GCCTCTCGCA AGGCCAAGGA CATCCACAGC GAGTACCAGG GTCGGATGAC CGGCGACGCC
GACACCGCCC GCAAGCTCCG CAAGCAGGCG TTCGCCCGGA TGGCGGACAT CGTCGAGGAG
GTCGAAGACG ACCTCGCCGG CATCTCCGCC GCCCGCGACG CCCTGAAGAC GCTGCCGGAT
ATCCGCCCCG ACGAACCGAC CATCGTCGTC GCCGGCTACC CCAACGTCGG CAAGTCGTCG
TTCGTCAACC TCGTCACGAA CGCCCGCAAC GAAACTGCGA GCTACCCCTT CACGACGACA
CAGATCCGCG TCGGCCACGT CGAACGCGAC CGCATCCGCT ACCAGCTCGT GGACACGCCG
GGGCTCCTCG ACCGCCCCGA GGCCGAGCGC AACGACATCG AGTCCCAGGC CGTCAGCGCC
GTCGAGCACC TCGCCGACGC CGTGCTCGTC TTCCTCGACG CCAGCGGCAA CTGCGGCTAC
CCGATCGAGG TCCAGCTGGA ACTGCGCGAC GCGCTCGAAG ACCGCTTCGA CGCGCCCGTC
CTGACCATCG CGAACAAGGC AGATCTCACC CGCGACGTCG AGGCCGACCA CTACATGAGC
GTCACCGAGG GCGACAACGT CGACGGCGTG CTCGACGCCG CTATCGAGGC CGTCGGCTAC
GAGATCGAGC TCCCCTTCGA CGACGAGTAA
|
|---|
| Protein sequence | MSHPFEDLPT TPTAEEVIDK AFSRAARAGK AKTGIEGQQS MLQTASNIVS DNLQNVVTAW
PDIDTLDPFY VELADAIITS NVEGEGGIDA LRQHLSEVQW ASRKAKDIHS EYQGRMTGDA
DTARKLRKQA FARMADIVEE VEDDLAGISA ARDALKTLPD IRPDEPTIVV AGYPNVGKSS
FVNLVTNARN ETASYPFTTT QIRVGHVERD RIRYQLVDTP GLLDRPEAER NDIESQAVSA
VEHLADAVLV FLDASGNCGY PIEVQLELRD ALEDRFDAPV LTIANKADLT RDVEADHYMS
VTEGDNVDGV LDAAIEAVGY EIELPFDDE
|
|---|
| |