| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0541 |
|---|
| Symbol | |
|---|
| ID | 8410043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 513139 |
|---|
| End bp | 515037 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645018867 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003176382 |
|---|
| Protein GI | 257386609 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.843572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTG CGGGCTGTTC GGATCAGCTC GGCGGTGGTG GTGACGGTGG CGACGGCGGC
GACGGTGGTG TCGACCCCGT TCAGGATCGT GTCACGGTCG ATCCCGCCGA CATCGAAGAG
GGCGGGACGT TCAGAGCCGC GATCGGTGAG GGACCGGACT CGTTCGACTT CGCGTACAGT
AGCTCCGCTT CGGCTTCGAT CCTCCACAAC CTCATCTTCG AGGGGATGGT GACGACCGAC
GCGAGCGGCG AGATCTATCC GTGGCTCGCC GAGTCGTACG AACAGGTCGA CGTACAGGAC
GTATCGCCGG CCGACTACGC GGACTACATG ACCTCCGTCC CCTACACCGA GACCGAAGAC
GGCGCGATGG TCATCGACAC GGACGCACAG ATCGTCCTGG AACACCCGGA CAACGATCCC
GCGTCCGGCG ACGACGCCCG CGTTCTGACC GTCGAAGAGG CCGGCGACGC CGTCGCGGAT
GGCACCTACG GGATGCACTT CCGGTTCGAC CTCCACGAGG GTGTCACGTT CCACAACGGC
AACGAGATGA CCGCCGACAA CGTCGTCGAG TCCTACGAGC GCATCCGGAA CTCGACGCTG
TCGGGCCAGT ACTACGACTC GATGCTGGAC ATCCAGGCCG ACGGCGACTA CACCGTCCAC
CTCTACATTC AGGAACCCGA CGCGGCCGCG GTGCTGGAAC TCGGCGACGC GCCGATCTAC
CCCTCCGAGT CGGCGACGCT CCCGCCCGAG GCGATGGACC CCCGACAGGG GAACACGCCG
ATGGGGACCG GAATGTTCGA ACTGGACGAG TTCCAGGAAG GCGAGTACGT CGTGTTCACC
GCCTTCGACG ACTACTGGTT CGACACCGAG ATGAAAGACT GGTTCGAGGG CTCCTCGGAG
TTCCCGAACG GCCCGGTCGT CGACGAGGTC GACGTATCGT TCGTCTCGGA GGACGCTTCA
CGGTCCGCGG CCCTCCAGGA AGGCGAGATC GACATGAGCT ACGGGCTGAC TGCGAGCACG
CTCAACGACT ACCAGAACTC CGAAGACTTC CGGACGGCCC CGACCGACGG TGCCGGCTAC
ACGTTCCTCC AGCACCCCGT CACGGTCGAA CCCTTCACCG ACAAGCGGGT TCGACAGGCG
ATCAACCACC TCATCCCGCG TGAGAATATC GCCCAGAACA TCTTCTCCGG GTGGGAAAAT
CCGGCTTGGA CGCCGCTGCC GCCGGTCGCC GCCGGGGCCG GGACCGACGA CTACGAGCAG
CTCGTCGAGG ACGGCCGCGA GTACAACGAA TACGACCAAG AGCGAGCGGC GGAGCTCGTC
GAAGAGGCAA TCGAGGACAA TGGCTGGGAG ACCCCGATCG AGGTCCAGCT GGAGACGAAC
TCCGACAACG ACGACCGCGT CCGTACCGTC GAGCTGATCC AGGAAGCGCT CAATCGGTCG
GAGTACTTCG AGGCCTCTCT GGAGACCTAC GAGTTCCTCG ACTTCATCGG CCAGCTCCTC
AGCGAGGAGT ACTACGACGA CGGCAAGTTC GCTTTCATCG GGCTCTCGGG CGGCTTCAAC
CCACACGGCT ACGCGAAGTC CGTCCACTCA CAGGACAACT TCGCTCAGTG TTGTAACTTC
CAGAACATCA ACGACGACGA ACTGAGCCAG CTGTTGCGCG ACGCACGATA CGGCGTCGAC
GTGGCCCAGG ATCCCGAACT CAGACAGGAG CGGTACAACG CGGTCTGGGA ACGCGTCCTC
GAACTCAGCG CCAACTCCTA CGGTACGCAC AGCACGCTCG TCGGTGTCGT CGACGACACC
GTCGTCAACG GGTTCAACAC GTATCCGAGC ACGCAGGACA TCATCGGATA CGGCCTGTTC
GCTCCACAGG ACGAACAGAT TACGTACCTC AGCAGATAA
|
|---|
| Protein sequence | MSLAGCSDQL GGGGDGGDGG DGGVDPVQDR VTVDPADIEE GGTFRAAIGE GPDSFDFAYS
SSASASILHN LIFEGMVTTD ASGEIYPWLA ESYEQVDVQD VSPADYADYM TSVPYTETED
GAMVIDTDAQ IVLEHPDNDP ASGDDARVLT VEEAGDAVAD GTYGMHFRFD LHEGVTFHNG
NEMTADNVVE SYERIRNSTL SGQYYDSMLD IQADGDYTVH LYIQEPDAAA VLELGDAPIY
PSESATLPPE AMDPRQGNTP MGTGMFELDE FQEGEYVVFT AFDDYWFDTE MKDWFEGSSE
FPNGPVVDEV DVSFVSEDAS RSAALQEGEI DMSYGLTAST LNDYQNSEDF RTAPTDGAGY
TFLQHPVTVE PFTDKRVRQA INHLIPRENI AQNIFSGWEN PAWTPLPPVA AGAGTDDYEQ
LVEDGREYNE YDQERAAELV EEAIEDNGWE TPIEVQLETN SDNDDRVRTV ELIQEALNRS
EYFEASLETY EFLDFIGQLL SEEYYDDGKF AFIGLSGGFN PHGYAKSVHS QDNFAQCCNF
QNINDDELSQ LLRDARYGVD VAQDPELRQE RYNAVWERVL ELSANSYGTH STLVGVVDDT
VVNGFNTYPS TQDIIGYGLF APQDEQITYL SR
|
|---|
| |