Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0471 |
Symbol | |
ID | 8409970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 449776 |
End bp | 450435 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645018794 |
Product | integrase family protein |
Protein accession | YP_003176312 |
Protein GI | 257386539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.73175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.809938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTCA AGGACTACGA CGACGACGAC GGAAAGCGAG TGTGGCTATC GGACGACGAA TTGGCTCGGT TGATCGACGA AGCTGAGACA CCTCACCAGC GGCTCGCCTT CTTGCTCGCT GGTCGGGTTG GTCTCCGACG GTCGGAGATC ACCGGAGTGT GTCCCGAGGA CCTCGTGGAG GGACCGACAG GAGATCACAT CCGAATCTGG GAGGACTACG CGAAGCGTGA CAAGTACAGA GAGCCGCCAG TCCCGTCCGA AGTCGTCACC ATCGCGGAGA CACTCGCGTA CCAGCAGGAC GACGACGAGC CTCTGATAGG CGTTGCTGGA TCGACTGTTT ACCGCTGGGT GCGCCGAGCT GCCGAGCGCC TCGAAGACGA GACCGACGAT AGGGGTTGGT CGTATCTCGA TGTACACGAT CTGCGACGGA CCTGGGGCAC GTACCTACTG GAACAGGGCG TGATCCCGTC CGTCGTCATG TCGTGGGGCG GTTGGGAGGA CTGGGAGACG TTTCGCCAGC ACTACCTCGG GGAGTTCTCC CCAGAGGCGA TCAAGCGAGA GCGTGGCCGT GTGGAATATC TCGAAGGTGG CGACGAAAAT ACGGAGATCG TCCATCCCGG CACGATGCCG TCAGAGAGCG GGCAGCACAC CGCAGATTAG
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Protein sequence | MRLKDYDDDD GKRVWLSDDE LARLIDEAET PHQRLAFLLA GRVGLRRSEI TGVCPEDLVE GPTGDHIRIW EDYAKRDKYR EPPVPSEVVT IAETLAYQQD DDEPLIGVAG STVYRWVRRA AERLEDETDD RGWSYLDVHD LRRTWGTYLL EQGVIPSVVM SWGGWEDWET FRQHYLGEFS PEAIKRERGR VEYLEGGDEN TEIVHPGTMP SESGQHTAD
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