Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0448 |
Symbol | |
ID | 8409947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 429258 |
End bp | 430046 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645018771 |
Product | HhH-GPD family protein |
Protein accession | YP_003176289 |
Protein GI | 257386516 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.514494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCTCA GATTGCCGTT CGGTAAAACA GAGGTTTCGG CAGAAGAAAT AGACTCACTG GTCGATAGAG ATCTGGCTGT AGAACATGCA AAAACAGGCA ATGTAAATCA GCCAGAAGAG AGGATTCAGG AGTTCATTGA GACAGTACCT GAACTGTTGA GCTGGCTCGA AGCCAACGGC AGAGTCTATC TCTGGAGAGA GACAACGGAC CCATGGAAAG TATATCTCGC CGAAATTCTA CTCCAGCGTA CCCGCGGTAA TGCTGTAGAG AAGATATACG ATGACGTTCT CCGCCAGTTT CCGGATCCCG AAACGCTGGT AGAGGCTACG GAAGGGGAAA TTGAAGATGT GGTCCGATCA CTTGGTTTCG TCAATCACAG AACACGGACT CTGACAGAAG TGGGAGAGAT ATTCACAGAA GACTTCGGTG GTGAGGTACC CGGTTCTCTA GATAAGCTGA AACGCCCGTG GAGAGTTGGA GACTACTCGG CCCGGGCAAC CCAGTTGTTT GCCCGGGAGC AGCCAATGGC ACTTGTCGAC TCGAACTTTG CACGAGTCAT TGGAAGAGTT CTGGGATACG AGATGCCATC ACAGCCACAC AAGAGCGACG ACGTATATGC CCTCATGGAG GCTCTCACTC CAGACGATCC AGATCTCGCG CGAAGCTTCA ATCTCGCTAT TCTGGATCTC GGAGCCCTCG TCTGTACTTC AGAAGATCCA GACTGTCCCT CGTGTCCGCT AAATTCTGCC TGCAGTTATT ACGAATCAGA GCAGGGAAGA CCAGACTAG
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Protein sequence | MGLRLPFGKT EVSAEEIDSL VDRDLAVEHA KTGNVNQPEE RIQEFIETVP ELLSWLEANG RVYLWRETTD PWKVYLAEIL LQRTRGNAVE KIYDDVLRQF PDPETLVEAT EGEIEDVVRS LGFVNHRTRT LTEVGEIFTE DFGGEVPGSL DKLKRPWRVG DYSARATQLF AREQPMALVD SNFARVIGRV LGYEMPSQPH KSDDVYALME ALTPDDPDLA RSFNLAILDL GALVCTSEDP DCPSCPLNSA CSYYESEQGR PD
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