Gene Hmuk_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0448 
Symbol 
ID8409947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp429258 
End bp430046 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content51% 
IMG OID645018771 
ProductHhH-GPD family protein 
Protein accessionYP_003176289 
Protein GI257386516 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.514494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTCA GATTGCCGTT CGGTAAAACA GAGGTTTCGG CAGAAGAAAT AGACTCACTG 
GTCGATAGAG ATCTGGCTGT AGAACATGCA AAAACAGGCA ATGTAAATCA GCCAGAAGAG
AGGATTCAGG AGTTCATTGA GACAGTACCT GAACTGTTGA GCTGGCTCGA AGCCAACGGC
AGAGTCTATC TCTGGAGAGA GACAACGGAC CCATGGAAAG TATATCTCGC CGAAATTCTA
CTCCAGCGTA CCCGCGGTAA TGCTGTAGAG AAGATATACG ATGACGTTCT CCGCCAGTTT
CCGGATCCCG AAACGCTGGT AGAGGCTACG GAAGGGGAAA TTGAAGATGT GGTCCGATCA
CTTGGTTTCG TCAATCACAG AACACGGACT CTGACAGAAG TGGGAGAGAT ATTCACAGAA
GACTTCGGTG GTGAGGTACC CGGTTCTCTA GATAAGCTGA AACGCCCGTG GAGAGTTGGA
GACTACTCGG CCCGGGCAAC CCAGTTGTTT GCCCGGGAGC AGCCAATGGC ACTTGTCGAC
TCGAACTTTG CACGAGTCAT TGGAAGAGTT CTGGGATACG AGATGCCATC ACAGCCACAC
AAGAGCGACG ACGTATATGC CCTCATGGAG GCTCTCACTC CAGACGATCC AGATCTCGCG
CGAAGCTTCA ATCTCGCTAT TCTGGATCTC GGAGCCCTCG TCTGTACTTC AGAAGATCCA
GACTGTCCCT CGTGTCCGCT AAATTCTGCC TGCAGTTATT ACGAATCAGA GCAGGGAAGA
CCAGACTAG
 
Protein sequence
MGLRLPFGKT EVSAEEIDSL VDRDLAVEHA KTGNVNQPEE RIQEFIETVP ELLSWLEANG 
RVYLWRETTD PWKVYLAEIL LQRTRGNAVE KIYDDVLRQF PDPETLVEAT EGEIEDVVRS
LGFVNHRTRT LTEVGEIFTE DFGGEVPGSL DKLKRPWRVG DYSARATQLF AREQPMALVD
SNFARVIGRV LGYEMPSQPH KSDDVYALME ALTPDDPDLA RSFNLAILDL GALVCTSEDP
DCPSCPLNSA CSYYESEQGR PD