| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0272 |
|---|
| Symbol | |
|---|
| ID | 8409770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 268118 |
|---|
| End bp | 269431 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645018597 |
|---|
| Product | ribonuclease II |
|---|
| Protein accession | YP_003176116 |
|---|
| Protein GI | 257386343 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0557] Exoribonuclease R |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.588423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0240332 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACG AGGACGCGCA GGCCGAGGCC GGCACGCCGG AGGGGCAAGG CCCCGTCGAG
ATCGACGAGG AGATGGCCCG CCACATGGCC AACAAGCGCG AGGAGCTGTT CGAGAAGTTC
GAGATCCGCG ACGCGTTTCC GCCCGAGGTG ATGGAGGAGG CCGAAGCGCG AACCACTGAC
GTGCAGGCCG AGATCGCCGA CGAGGTCGAC GAGCGCGAGG ACCTGCGAGA GATGACGACG
TGGACCACGG ACCCGATCGA CGCGCAGGAC TTCGACGACG CCATCTCCGT CGAGGAACGG
GACGACGAGT ACGTCCTGTG GGTCCACATC GCCGACGTGA CCCACTACGT CAACCCCGAC
ACCGCGATGT GGGAAGAGGC CGTCGAGCGG GGCAACACCG TCTACCTGCC CGGCTACACC
ATCCACATGC TGCCACCGAT GCTGGCCGAG ACTGTCTGTT CGCTCGTCCC CAACGAGGAT
CGGCTGGCCC ACACCGTCGA GATGCACCTC GACAAGGACG ATCTGGGCTA CGAGGAGATC
GACATCTACA AGTCGGTGAT CCGCAGCGAC GCCCGGCTCA CCTACACCGA GGCCGAGCGC
CTGCTCGACG AGCCCGAGAC GGCCGAGGAG CTACTCGAAG ACCAGCGCGT CGACCTGGCC
GAAAAGACCG AACTCATCTG GAACCTCGCG GACGCGATGC ACGAGCAACG CAAGGAAGAG
GGGTCGCTCG TGCTCAACCC GGCCCGTGAC CGCGCCCACA CGATCATCGA GGAGTGCATG
CTCAAGGCCA ACAAAGCCGT CACGCACGAA CTCATGTGGG ATCGCGGCGT CGAGGCGATG
TACCGCGTCC ACCCCCAGCC CAGCCCCGAA GAGTGGGACG AGGCCCTCGT CGAGATCCAG
GAACTCGACG GCGTCTCGAT CCCCGGCGAC GCCTGGGACG ACCCACGGAA GGCCGTCAAC
GCGACGCTGG AGCAGGCACC GGGCCGACAG CTGGACAAGA TTCAGTGGGC CGTCATGAAG
GTGATGCCCC GCGCGAAGTA CATGAACGAC CCCTTCGGCG GCCACCACGC CCTGAACTTC
GAGATCTACG GGCACTTCAC CTCGCCGATC CGACGGCTCT CGGACCTGAT CAACCACTGG
ATCGTCTACA CGAACGACGT GCCAGAGGAC CTGATCGCGC TGTGTGATCG CGCCAGCGAC
AAGCAGAAGG CAGCCGAGAC CTGCGAGCGC GAGTACAAGC AGTTCCTCGA AGAGATCGGT
CTCGATCCGT CTGCGGTGAA CAATCGCGGG CTGGAAGTAG TGGACGAGGA CTGA
|
|---|
| Protein sequence | MSNEDAQAEA GTPEGQGPVE IDEEMARHMA NKREELFEKF EIRDAFPPEV MEEAEARTTD
VQAEIADEVD EREDLREMTT WTTDPIDAQD FDDAISVEER DDEYVLWVHI ADVTHYVNPD
TAMWEEAVER GNTVYLPGYT IHMLPPMLAE TVCSLVPNED RLAHTVEMHL DKDDLGYEEI
DIYKSVIRSD ARLTYTEAER LLDEPETAEE LLEDQRVDLA EKTELIWNLA DAMHEQRKEE
GSLVLNPARD RAHTIIEECM LKANKAVTHE LMWDRGVEAM YRVHPQPSPE EWDEALVEIQ
ELDGVSIPGD AWDDPRKAVN ATLEQAPGRQ LDKIQWAVMK VMPRAKYMND PFGGHHALNF
EIYGHFTSPI RRLSDLINHW IVYTNDVPED LIALCDRASD KQKAAETCER EYKQFLEEIG
LDPSAVNNRG LEVVDED
|
|---|
| |