Gene Hmuk_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0246 
Symbol 
ID8409744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp242451 
End bp243176 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content56% 
IMG OID645018571 
Productputative circadian clock protein, KaiC 
Protein accessionYP_003176090 
Protein GI257386317 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.168634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.157479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TCACAAAGAC AGGTATCGAC GGCCTCGACG CAATTTTGAA CGGTGGTATC 
GTCACGAACT CGACGACGCT GGTGAGTGGG AACCCCGGTG CCGGGAAGTC GATTCTCGGC
CTCCAGTACA TCTACAACGG CGTCGAGCAG TTCGACGAGA AAGGGATCTA TCTCTCCTTC
GAAGAGAACG AATCCGACCT CAGAGAGGCC GCGGAGTCGA TCGGCTTCGA CAAGTGGCCC
GAATTCGTCG AGAGCGGCGA CATCAAAGTG TACGACAAGC AGGTCTTGCT TCGGGAGAAC
GACTTCTCTT CCTCGCTGGA ACTACTCCTC GACGACCTCG AAGACGACAA GTACGACCGG
CTGGTGCTGG ACTCGCTGAC GATGTTCGAG CTGTTCTTCG AAGACGAGAC AGAAAAACGC
ACGTACCTGC TGAAGTTCAC GGACATCCTC AACAACAACG GATTGACGAG TCTCCTGACC
AACGAACAGG GCGCGGTGTT CCCGGACACG GACATCGGCC TGGAGAACTA CCTCACCGAC
GGCAACATCT ACCTGATCCA GACGCCGACC GACACCGGCG TCAACCGATA CGTCTGGGTC
GCGAAGATGC GCAAACAGGA CATCGAGACG GACATCTACC CGATGGAGAT CTCGTGGGGT
GGTATCAAGG TCCACGAAAA CGCGAGCGCG TTCTCGATGA TGAGCGAAGA GGACTCTCCG
ATCTGA
 
Protein sequence
MIELTKTGID GLDAILNGGI VTNSTTLVSG NPGAGKSILG LQYIYNGVEQ FDEKGIYLSF 
EENESDLREA AESIGFDKWP EFVESGDIKV YDKQVLLREN DFSSSLELLL DDLEDDKYDR
LVLDSLTMFE LFFEDETEKR TYLLKFTDIL NNNGLTSLLT NEQGAVFPDT DIGLENYLTD
GNIYLIQTPT DTGVNRYVWV AKMRKQDIET DIYPMEISWG GIKVHENASA FSMMSEEDSP
I