Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0246 |
Symbol | |
ID | 8409744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 242451 |
End bp | 243176 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645018571 |
Product | putative circadian clock protein, KaiC |
Protein accession | YP_003176090 |
Protein GI | 257386317 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.168634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.157479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAAC TCACAAAGAC AGGTATCGAC GGCCTCGACG CAATTTTGAA CGGTGGTATC GTCACGAACT CGACGACGCT GGTGAGTGGG AACCCCGGTG CCGGGAAGTC GATTCTCGGC CTCCAGTACA TCTACAACGG CGTCGAGCAG TTCGACGAGA AAGGGATCTA TCTCTCCTTC GAAGAGAACG AATCCGACCT CAGAGAGGCC GCGGAGTCGA TCGGCTTCGA CAAGTGGCCC GAATTCGTCG AGAGCGGCGA CATCAAAGTG TACGACAAGC AGGTCTTGCT TCGGGAGAAC GACTTCTCTT CCTCGCTGGA ACTACTCCTC GACGACCTCG AAGACGACAA GTACGACCGG CTGGTGCTGG ACTCGCTGAC GATGTTCGAG CTGTTCTTCG AAGACGAGAC AGAAAAACGC ACGTACCTGC TGAAGTTCAC GGACATCCTC AACAACAACG GATTGACGAG TCTCCTGACC AACGAACAGG GCGCGGTGTT CCCGGACACG GACATCGGCC TGGAGAACTA CCTCACCGAC GGCAACATCT ACCTGATCCA GACGCCGACC GACACCGGCG TCAACCGATA CGTCTGGGTC GCGAAGATGC GCAAACAGGA CATCGAGACG GACATCTACC CGATGGAGAT CTCGTGGGGT GGTATCAAGG TCCACGAAAA CGCGAGCGCG TTCTCGATGA TGAGCGAAGA GGACTCTCCG ATCTGA
|
Protein sequence | MIELTKTGID GLDAILNGGI VTNSTTLVSG NPGAGKSILG LQYIYNGVEQ FDEKGIYLSF EENESDLREA AESIGFDKWP EFVESGDIKV YDKQVLLREN DFSSSLELLL DDLEDDKYDR LVLDSLTMFE LFFEDETEKR TYLLKFTDIL NNNGLTSLLT NEQGAVFPDT DIGLENYLTD GNIYLIQTPT DTGVNRYVWV AKMRKQDIET DIYPMEISWG GIKVHENASA FSMMSEEDSP I
|
| |