Gene Hmuk_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0242 
Symbol 
ID8409740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp239703 
End bp240389 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content57% 
IMG OID645018567 
Productflagellin 
Protein accessionYP_003176086 
Protein GI257386313 
COG category[N] Cell motility 
COG ID[COG1681] Archaeal flagellins 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.592647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.42007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TATTCGACGA CGAGGAAAAC GACCGCGGGC AGGTCGGGAT CGGGACGCTA 
ATCGTGTTCA TCGCGATGGT CCTGGTCGCG GCGATCGCCG CCGGTGTGCT GATCAACACC
GCCGGGTTCC TGCAGTCCAG TGCCGAAGAG AGCGGTGAAC AGTCCAGTGC GCAGGTCACC
AACCGACTGC AAGTCGTCAA CGCAGTTGGT GAAGAAATCA TCGATGCTGA CTCCTCAACG
AGCGGCGACG CTGAGGTGGC TCGTGTCATC TTGACAGTTA AGAAAGCTCC GGGTGCCGAC
AACGTCGATC TGGAAACTAC TACCGCACAG TGGGTCTCCG ACGGTGGGAC CTTCAATATT
GTCGAGGACA CTAGATTCGA CAACACCAAC CACGATGCGG CATTCTTGAC CGGGACATTC
CAAGATGATG ACGCTTCTAT CTCTGACAGC ACCGTGCTTA ATGATCCTGC GGACCGCGCT
ACCATGACCT TCGAGACTAC TCAGTTGAGT TCTACCAACA GTGGCGGTGC AACTGTTGAT
GGGGGTAACG ATGATGCACT CGTTAGTGAC TCCCTCTCCG AGGGATCGAC TGCGACGGTC
AAGCTGAACA CGCAGGCCGG TGGCGAGACG ACGGCGACGC TGGTCGTGCC CGAGTCCCTC
TCCGGGAAAT CTGCGGTCAG CCTCTAA
 
Protein sequence
MIELFDDEEN DRGQVGIGTL IVFIAMVLVA AIAAGVLINT AGFLQSSAEE SGEQSSAQVT 
NRLQVVNAVG EEIIDADSST SGDAEVARVI LTVKKAPGAD NVDLETTTAQ WVSDGGTFNI
VEDTRFDNTN HDAAFLTGTF QDDDASISDS TVLNDPADRA TMTFETTQLS STNSGGATVD
GGNDDALVSD SLSEGSTATV KLNTQAGGET TATLVVPESL SGKSAVSL