Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0101 |
Symbol | |
ID | 8409598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 99552 |
End bp | 100301 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645018427 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_003175947 |
Protein GI | 257386174 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTACGG GGGACACCGG AGGGACACTG ACCGCGCTAG GCAAGACGTT CAGGATTGTC GAATACATGA CCGAGACGGA CGGGAGCGTC CGCATCACCG AACTGGCGAC GGAACTGGAC ATCTCGAAGA GTACGGTCTA CAAACACTTG AACACGCTCA GGTCGGAGGG ATACGTCGAC AAAGACGACG TGGCCTACCG GCTGAGCCCG CGCTTTATCG ACGTTGGTGA ACACGTCAAA GACTCGTTCG AGCCCTACGC CCAGGCGAAG CCGGCGATCG ACAGCCTCGC CGAAACCACC GACGAGACGG CGGGACTCGT CCTCGAACAC GATCGGCAGG CCGTCGATAT CTACTCGACG GTCGGCTCTC ACCCGGAGGC GTGTTCGATG ACGACGACGC GCCATCTCCA CTGCAGCGCC CCCGGGAAGG CGATCCTCTC GACGCTGTCG GACGAGAGCG TCGACGAGAT CCTCGAGGAA CCGCTTGCGG CGCTGACGCC CGACACGATC ACCGACACCG GTCGCCTCCG GAGCGAACTG CGACGGATCG GCGAACGCGG AATCGCCTTC GCTCGGGGCG AACAGCGCGC CGACGTCAAC AGCGTCGCGG TGCCCATCGA GTTCGAGGAC TACCAGGGTG CCGTCTACGT CGCCGGCACG GCGAGCCGGC TGTCGAGCAA GCGACTCGAA GAGGACGTAC CGGGGATGGT GCTGAGTACG GTGCGAGAGA TCGAAGCCAA GATCGCCTGA
|
Protein sequence | MATGDTGGTL TALGKTFRIV EYMTETDGSV RITELATELD ISKSTVYKHL NTLRSEGYVD KDDVAYRLSP RFIDVGEHVK DSFEPYAQAK PAIDSLAETT DETAGLVLEH DRQAVDIYST VGSHPEACSM TTTRHLHCSA PGKAILSTLS DESVDEILEE PLAALTPDTI TDTGRLRSEL RRIGERGIAF ARGEQRADVN SVAVPIEFED YQGAVYVAGT ASRLSSKRLE EDVPGMVLST VREIEAKIA
|
| |