Gene Hmuk_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0101 
Symbol 
ID8409598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp99552 
End bp100301 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID645018427 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003175947 
Protein GI257386174 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGG GGGACACCGG AGGGACACTG ACCGCGCTAG GCAAGACGTT CAGGATTGTC 
GAATACATGA CCGAGACGGA CGGGAGCGTC CGCATCACCG AACTGGCGAC GGAACTGGAC
ATCTCGAAGA GTACGGTCTA CAAACACTTG AACACGCTCA GGTCGGAGGG ATACGTCGAC
AAAGACGACG TGGCCTACCG GCTGAGCCCG CGCTTTATCG ACGTTGGTGA ACACGTCAAA
GACTCGTTCG AGCCCTACGC CCAGGCGAAG CCGGCGATCG ACAGCCTCGC CGAAACCACC
GACGAGACGG CGGGACTCGT CCTCGAACAC GATCGGCAGG CCGTCGATAT CTACTCGACG
GTCGGCTCTC ACCCGGAGGC GTGTTCGATG ACGACGACGC GCCATCTCCA CTGCAGCGCC
CCCGGGAAGG CGATCCTCTC GACGCTGTCG GACGAGAGCG TCGACGAGAT CCTCGAGGAA
CCGCTTGCGG CGCTGACGCC CGACACGATC ACCGACACCG GTCGCCTCCG GAGCGAACTG
CGACGGATCG GCGAACGCGG AATCGCCTTC GCTCGGGGCG AACAGCGCGC CGACGTCAAC
AGCGTCGCGG TGCCCATCGA GTTCGAGGAC TACCAGGGTG CCGTCTACGT CGCCGGCACG
GCGAGCCGGC TGTCGAGCAA GCGACTCGAA GAGGACGTAC CGGGGATGGT GCTGAGTACG
GTGCGAGAGA TCGAAGCCAA GATCGCCTGA
 
Protein sequence
MATGDTGGTL TALGKTFRIV EYMTETDGSV RITELATELD ISKSTVYKHL NTLRSEGYVD 
KDDVAYRLSP RFIDVGEHVK DSFEPYAQAK PAIDSLAETT DETAGLVLEH DRQAVDIYST
VGSHPEACSM TTTRHLHCSA PGKAILSTLS DESVDEILEE PLAALTPDTI TDTGRLRSEL
RRIGERGIAF ARGEQRADVN SVAVPIEFED YQGAVYVAGT ASRLSSKRLE EDVPGMVLST
VREIEAKIA