Gene Hmuk_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0043 
Symbol 
ID8409540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp39650 
End bp40717 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content66% 
IMG OID645018381 
Producttranscriptional regulator, TrmB 
Protein accessionYP_003175901 
Protein GI257386128 
COG category[K] Transcription 
COG ID[COG1378] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.314996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACCT CAGACGAACA CGACGACGAA CAGCTCCGAG AGGAGCTGCG CGTCTTCGGA 
CTCTCCGATA CGGAAATCGA CACGTACCTC GCGTTGCTCG CGTGTGGGGA GGCCTCGACG
AGTACGGTCT CCGAGACGAC GGACGTGACC CAGCGGGCGG TGTACAACAT CGCCGAGCGA
CTCGAAGGCA GGGGGCTCGT GCGGGTCAAC GACCACGCCT CTCCGACGAC GATTCGGGCG
CTTCCGCCCG CAGAGGCGAT CGAGAACCTC TCTGACCGTC TCGACTCGAT CAGGCCGGCG
CTCGAAGCGC GCTTCAACGA GACGACGCCG GAGACCCCGG AGATCCAGAT GATCAAGTCC
CGCGAGACGG CGCTCAAACG CATCAAGAGC GCGATCTCGG CGGCGAGACA GGAGCTGTTG
TTGGCGGTTC CGGAACACGT CTTCCCGGAG ATCGAATCGG AGCTGCGCAC CGCCGTCGAC
AGCGACGTGG TCGTCTTCCT CCTGATCGGT GGGATGGACG AGGTCGACGG CGACGGCAGC
GAGTTCGCCG GGATCGCAGA CGTGGTCCGG TACTGGGGGG AGAGCCTCCC GCTGGTCTAC
ACGGTCGACG ACGCGTCGGC GATGATCGGC GACTCCACGA TCGTCTCGGG CACACACACG
GACGACGTCG CCGTGACGGT CTCGGAACCC CAGCTGTCCG GGTCGATTCT CGGGATGTAC
TTCAGCGCCT ACTGGCCCGC CGCGACGGAG CTGTACGTCA CCGATCCGGA TCCGCTGCCC
AGGACCTACG ACTGGTTCCG GCAGGCGACG CTGCACGCGA CCGTACACGA GCAGGCCGGC
GTCGATCTGT ACGCCGAGGT CGAGACGGAG TCTGGGACGA CGGTGTCCGG GCCGGTCACG
GAGATCAGGC AGGCGTTCAT CGAACCGACG ACCAACGACT TCACGCTCGA AAACAGCTTC
TTCATCGACA CCGGCGACGG GATCGTCAGC GTCGGCGGCA AGGGGTCGTT CATCGAAGAC
TACCAGTCGC GCTCCGTCAT GCTCCGCCGG CTGGACGCCG TCGAGTAG
 
Protein sequence
MGTSDEHDDE QLREELRVFG LSDTEIDTYL ALLACGEAST STVSETTDVT QRAVYNIAER 
LEGRGLVRVN DHASPTTIRA LPPAEAIENL SDRLDSIRPA LEARFNETTP ETPEIQMIKS
RETALKRIKS AISAARQELL LAVPEHVFPE IESELRTAVD SDVVVFLLIG GMDEVDGDGS
EFAGIADVVR YWGESLPLVY TVDDASAMIG DSTIVSGTHT DDVAVTVSEP QLSGSILGMY
FSAYWPAATE LYVTDPDPLP RTYDWFRQAT LHATVHEQAG VDLYAEVETE SGTTVSGPVT
EIRQAFIEPT TNDFTLENSF FIDTGDGIVS VGGKGSFIED YQSRSVMLRR LDAVE