Gene Hmuk_3351 details

Gene Information

• Locus tag: Hmuk_3351
• Symbol: nrdR
• ID: 8409429
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halomicrobium mukohataei DSM 12286
• Kingdom: Archaea
• Replicon accession: NC_013201
• Strand: -
• Start bp: 158243
• End bp: 158731
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 645018276
• Product: transcriptional regulator NrdR
• Protein accession: YP_003175797
• Protein GI: 257373023
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.634201
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACTGCC CGGACTGCGG GAACGAGCGA ACACGCGTCA TCGATACAGA AACCAGTGCC 
GACGGAACCT CCGTCCGACG GCGTCGCGAG TGTCAACGCT GTTCGTTCCG CTTTACCACC 
TACGAACGTC CGGAGTGGGA GTCCCTCCAA GTGAAAAAAC GCGACGGAAC CATCGAATCG 
TTCGACCGAC AGAAACTCCG CGCAGGGATC GAGCGAGCCG TTGAGAAGCG AGATGTGACC 
GAGACAACAG TGACTGCTCT CGTCGACGAT GTCGAGAGCG AACTGCAAGG TCGAGAGGCA 
CGTATCGTCT CTTCGAGTCT CATCGGCGAA CTCGTCTCTG AAAGCCTCCG CACGCTCGAT 
AAGGTAGCCT ACATTCGATT TGTCTCCGTT TACAAAGCAT TCTCTGAGCC GCAGGAATTC 
CTGAGAGAAC TTGATGCAGT CTTGGATGCG GAACTCGATG ACTTCGAAGC CTCGAACAGT 
TCACAATGA 

 

Protein sequence

MNCPDCGNER TRVIDTETSA DGTSVRRRRE CQRCSFRFTT YERPEWESLQ VKKRDGTIES 
FDRQKLRAGI ERAVEKRDVT ETTVTALVDD VESELQGREA RIVSSSLIGE LVSESLRTLD 
KVAYIRFVSV YKAFSEPQEF LRELDAVLDA ELDDFEASNS SQ