Gene Hmuk_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3338 
Symbol 
ID8409416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp148574 
End bp149755 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content61% 
IMG OID645018266 
Productferrichrome-binding protein 
Protein accessionYP_003175787 
Protein GI257373013 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGG ATGACACCAC GCACCGGGTA CCGACGCGCA GAGAATACAT CAAAGGCGGC 
ACCACACTCC TCGGCGTCGG CCTTCTCGCC GGCTGTTCCG AGAGCGAATC GGAGTCGATC
TCGACGGAGC AACCGACGAC CTCTGAGACC CAGGCCGAGA CCACTACGGA GAATCGGTCG
TACACGGTCA CGATGGAACC AGTAGGCGAC GTCGAGTTCG ACAGTGTCCC TGAGTCGGTG
ACGGTCTACA ATCCGGACTA CATCGACATG ATGGTTGCAC TGGGCCACGG CGATGCAGTG
GAGTCCGTCT GGTACAAGTC CCGTTACGTT ACGCGTCACT ACGACGAACT GGATGGGGTC
TCGATAGACG TATCAGCACT GACACAGCTA TACAGCGACG GTATCGCCAA GGAGGTGTTC
TACGACATCG GAGGGGATTT GCACCTGATG GATCCGAACC TCCTCGTCAA CAAGTACAAG
AACATCGAAC AGTCAGACAT CGAGGAGTTA GAGTCCGAGA TTGCACCGTT CTTCGGGAAC
ACGATCTTCC GCCGGACGGA CGACTGGCAC ACGTATCGCT ACTACACCCT GTACGAGGCT
TTCGAGAAAG TTGCGGCGGT CTTCCAGGAA CGCGAGCGCT ACGAGGCGAT CCGGTCCATT
CACGACGACG TCGTCGCCGA TGTCGAAGCT CGGGTGCCGG GGCCGGACGC GCGGCCGAAC
GCTGCGCTGG TGTGGCAGGG CGAGAACGAG CCCGAAGAGT TCTATCCGTA CCGGCTCTCT
GGAAAGGGCG CGAACAAGGA GCACTTCCAC ACGCTCGGGA TCACCGACGC GTTCGCTGGT
ACCGGCGTCG ACGGCCTCTC GACCACGGAC CGAGGCACTC TCGACTACGA GACGCTGCTC
GAAGTCGACC CGGACGCAAT CCTCCTCCGT GGCCACGGCG ACAAGTCCAG AGAAGAGTTC
CGTAACACGG TCCTCTCGTT CATGCGAGAG CACTCCGTCG CCAGCCAGTT GACTGCCGTC
GAGAACGAGA CAGTGTTCCG TGGCGGTCCG ATTTACGCGG GGCCGCTCCA CAACCTCTTC
CTGCTCGAAC GGTTCGCCCA GTCGTTCTTC CCAGACATCT TTACGGAGGA CCAGCTGTTC
GACCACCAGC GCGTCGCCGA GATCGTCACG GACAGCGCCT GA
 
Protein sequence
MALDDTTHRV PTRREYIKGG TTLLGVGLLA GCSESESESI STEQPTTSET QAETTTENRS 
YTVTMEPVGD VEFDSVPESV TVYNPDYIDM MVALGHGDAV ESVWYKSRYV TRHYDELDGV
SIDVSALTQL YSDGIAKEVF YDIGGDLHLM DPNLLVNKYK NIEQSDIEEL ESEIAPFFGN
TIFRRTDDWH TYRYYTLYEA FEKVAAVFQE RERYEAIRSI HDDVVADVEA RVPGPDARPN
AALVWQGENE PEEFYPYRLS GKGANKEHFH TLGITDAFAG TGVDGLSTTD RGTLDYETLL
EVDPDAILLR GHGDKSREEF RNTVLSFMRE HSVASQLTAV ENETVFRGGP IYAGPLHNLF
LLERFAQSFF PDIFTEDQLF DHQRVAEIVT DSA