Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3223 |
Symbol | |
ID | 8409298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013201 |
Strand | + |
Start bp | 1434 |
End bp | 2411 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645018159 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003175684 |
Protein GI | 257372910 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.738302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGTC AGCTGCTCGT TCCGCTGCTC GATCAGGTTC GATTCAAGCG CGAGCAGTTG AAAGACCGAC TCCCGACGCT GCCTGGAACG CCGCTGTTGT TCTTGAGTCC GTTCTTCCTG CTGTTCGGCG TGTTCCTCGC TATTCCGGTG TTCTACACCT TCTACCTGTC TTTCTTCACG TTCCAGGGCG TCTCGACGGA GGCGCTGTTC GCCATCGACG TCGGCGCGTA CCAGATCATG ATCCCCGAGA TGGCCAACCT CCAGTACGTC GGTCTGGACA ACTATCGACG CCTGCTCACC GACAGCGTGT TCTACCAGTC GCTGTTGAAC ACGGCGATCA TCTTCGTCGT GCAGGTGCCG TTGATGGTCG CGCTGGCACT CGGGCTCGCG CTCGTGTTGA ACGCCGCCTA CACCAGGTAC AAGGGCATCT TCAGGAGCCT CCTGTTGCTC CCGGTGTCGG CGAACACGGT CGCGTACTCG GCGGTGTTCA TCGTGATCGC GGCGGAAGGC GGGATCGCCG ACATCGCGCT CGGAGCGATC GGTATCCCGC CGATCGACTG GATCAGCGAC GGCTTCTGGG CGCGGAACCT CGTGGCGTTC ATGTCGGTGT GGCGCTGGAC GGGGTACAAC ATGATCATCA TCCTCGCCGG ACTGCAGACG ATCTCGCCGT CGCTGTACGA GGCCGCAGAG ATCGGCGGCG CGACGAAGAT CCAGAAGTTC CGCCACATCA CGCTACCACA GCTGAAGCCG ATCATGCTGT TCGTCTTCGT GACGACGACG ATCGGCGTCT TCAAGAAGTT CGCCGAGCCG ATGATCGTCA TCAGCTCCGG GGGGCCGATC AACGAGACGC GAACGATCGT CTACTACATC TGGCAGGTGG CGTTCCAGAA CCTCGAACTC GGCTACGGGA GCGCGCTGAC CGTCGCCCTC GTGGCGATCA TCATGACCCT GTCGCTCATC CAATTCAAGG TGTCCTAA
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Protein sequence | MSRQLLVPLL DQVRFKREQL KDRLPTLPGT PLLFLSPFFL LFGVFLAIPV FYTFYLSFFT FQGVSTEALF AIDVGAYQIM IPEMANLQYV GLDNYRRLLT DSVFYQSLLN TAIIFVVQVP LMVALALGLA LVLNAAYTRY KGIFRSLLLL PVSANTVAYS AVFIVIAAEG GIADIALGAI GIPPIDWISD GFWARNLVAF MSVWRWTGYN MIIILAGLQT ISPSLYEAAE IGGATKIQKF RHITLPQLKP IMLFVFVTTT IGVFKKFAEP MIVISSGGPI NETRTIVYYI WQVAFQNLEL GYGSALTVAL VAIIMTLSLI QFKVS
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