| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2521 |
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| Symbol | |
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| ID | 8381674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2706157 |
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| End bp | 2707524 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645005286 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003162456 |
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| Protein GI | 256833729 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.869508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACACCA CACCAACCAC TCCGCAGGAT GGCAGCCCGC AATCCACAGG ACTTACCCAC
AAGTCGCTGA CCGCCACAAT CCTCGCCATC GCAATCCCCT CACTGGCCGC ACTGGTCGCC
GAACCCCTCT TCATCCTCGT CGACACCGCC ATCGTAGGAC GGCTCGGAAC CAGCGAACTC
GCCGGACTCG CACTCGCATC CACGGTCCTC ACCACCACCG TGGGGCTGTG CATTTTCCTC
GCCTACGCCA CCACAGCAAC CGTCGCCCGC CACCTTGGAG CCGGACGCCG CACCACAGCC
CTCAGCGCTG GCATCGACGG CCTCTGGCTC GCCGCCACAC TCGGCGCGCT TCTCACCCTC
ACCCTGATCC TCACCGCCCC CCAACTCCTC ACCATCCTCG GTGCCCACGG TGACGTCCTC
ACCCACGCCA CCACCTACCT ACGATGGTCC GCACCCGGCC TCCCAGGAAT GCTCATTGTT
ATGGCAGCCA CCGGAGTGCT CCGAGGATTC CAAAACGCCA CCACACCCAT GTGGGTTGCC
GGCGCCGGTG CCGCACTCAA CGCCGCACTG TCCTTCACGC TCGTCTGGAT CCTCGGCATG
GGAATAGCCG GATCAGGATT GGGCACAGCC ATCACACAAA TCCTCATGGC CATTGCCCTC
ACCATCCCTG TCGCCACCCT CGCCCGACGA CACAACGCCG CCCTACGCCC CGGAACAACC
GGGATCCTCC ACTCACTCGC CTCCGGTGCC CCCCTCTTCT TGCGCACCCT TTCCCTGCGT
GCAGCGATCA TCCTCACCAT CATCACCGCC ACCTCGCTAG GAACTGTTCC CCTCGCCGGA
CACCAAGTGA TCAACAGCCT GTGGGGATTC GCAGCCTTCG CCCTCGACGC TCTCGCCATC
GCCGCGCAAA CCCTCATCGG GCACCACCTC GGCGCCGCGG ACCGCACCGG TACGCGCCAC
ATTCTCCGCG TCACCCTCTG GTGGGGAACA CTATCCGGCG CCGTCATTGG TGCCCTCATC
ATCCTCATCG CGTACACCGC CGCACCACTG TTCACCCCCG ACCCAACAGT CCAACACGCC
ATCCAACTCG CCGCCATCGT CGCCGGGATC ACCATGCCCA TCACCGGGTG GGTGTGCGTC
CTCGACGGAG TGCTCATCGG AGCCGGAGAC GGCCGCTACC TCGCAGGTGT TGGCCTCATC
AACCTCGCCA TGTACACGCC AGCCGTCCTC ACCGTCTACC ACCTCGCACC CCACGGGCCC
ACCGGCCTGC TGTGGTTGTG GGTCGCCTTC GCCGGTGTCT TCATGGGAGT ACGCGCCCTC
ACCACCGGGT GGCGTATTCG CACCCAAGCA TGGATGCGCA TCGGCTAG
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| Protein sequence | MDTTPTTPQD GSPQSTGLTH KSLTATILAI AIPSLAALVA EPLFILVDTA IVGRLGTSEL
AGLALASTVL TTTVGLCIFL AYATTATVAR HLGAGRRTTA LSAGIDGLWL AATLGALLTL
TLILTAPQLL TILGAHGDVL THATTYLRWS APGLPGMLIV MAATGVLRGF QNATTPMWVA
GAGAALNAAL SFTLVWILGM GIAGSGLGTA ITQILMAIAL TIPVATLARR HNAALRPGTT
GILHSLASGA PLFLRTLSLR AAIILTIITA TSLGTVPLAG HQVINSLWGF AAFALDALAI
AAQTLIGHHL GAADRTGTRH ILRVTLWWGT LSGAVIGALI ILIAYTAAPL FTPDPTVQHA
IQLAAIVAGI TMPITGWVCV LDGVLIGAGD GRYLAGVGLI NLAMYTPAVL TVYHLAPHGP
TGLLWLWVAF AGVFMGVRAL TTGWRIRTQA WMRIG
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