| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2462 |
|---|
| Symbol | |
|---|
| ID | 8381615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2641580 |
|---|
| End bp | 2644408 |
|---|
| Gene Length | 2829 bp |
|---|
| Protein Length | 942 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645005227 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003162397 |
|---|
| Protein GI | 256833670 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0374837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCG AGACACCACC ACCAGCACTC CAAGACCTCA TTGACCAGGC GCGGGCGATG
CCACTTGGCC GCGAAGAGCG TGACGTTGTC CGGCAAGCAC TCACCATGGC AGAAGAACTC
CACCTTGACG GGTGGGCCTA CCTGCTGCGC CTGTGGTTCA ACCGGTCCTG CTTCATGGTG
GGGGATACTG ATGCGCTCCT GACCAGCTTT ACCAGGTCAC TCGCGATCCA CGACTCCAAC
CCCGAACGGT TCCCCCTGTC CGTGGACGAA GACACCCACC TGCTGTTCCA ATACAAATGG
GTCGCTGACC TCCTCAACGA CTCACCCGCC TACTCCCTCA CCCAGATCAC CCAGATCTAC
AACGACATGG AACGCCGCTA CCAACAGGCT GGGGTGTCAC CGTCGGGCTA CCTGCAAACC
AGGTTCGGTG GAGCCTGCGA CCGAGGTGAA TGGGACGACG CGGAACACTA CTTCGCACAA
CTCCAGGCAA CGCCACGCGA TGACCTGTCA CACTGTGACG CGTGCTCCCG CTCCACCGCA
GCGCTCTACT ACCGCGACAA AGGTGACACT CAACGGGCAC GAGAACTCCT TCAAGAAATC
TTTGACGGCA ACTTCATGTG CGGAGATGAA CCCGAATACT CCGAAACTCA AGCCATGTTC
CTTGCCCTGC GGGACAACGA CCTAGAGTCA GCCCGCTTTT TGCACCACAA AAGCCTCACC
GCGATCCGAG CCAAAGAAGA ACCCGGCTCC ATGCTCCTCG CCCACGTCGA CTTTTGTGTC
CTTACTGGAA ACACCCCCCG CGCAGTCGCA CTGGTTGAAC AGTTCCCCCG AGTCTTTGAC
ACCTCACCAC TCAACGTCGC CCGCCAGTTC CACTGCCTCA CGACCCTAGC TGTCCTTGCC
GACGCGATGA TCGCCGATGG CCACGGTGAC TTGCCCATCC GAGGGACCAG TGCACCCCAC
TTCGCGCGGC TCCTTGGCCT GGCTCACCAC GACGGTACGC CTACCCGTGA TCTCACCCCA
CACGACATCA GTGCGCCAAC GTGGCAACAA GCCCGGACCC ACGCCGACGC CTTCAACGCG
CGGAACAACA CATCCCACTA CGACACCCTG TACGCCAACG CGCGCGCCCG CCGCGAAGAA
CGCTGGGACC TGCCCCTAGG CATCGACGAG TACCACACGC CAGTGTCCAC ACCCGTTGCC
CCCACCCCGG TCAGCGTGCT GGACCACGTT GCAGCGATCT ACAACACCAT CACCACCCAG
CCTGACCAAG CCCTCACCCA CTACCAGGCA AGCCGGGACT TGCCCACCAC AGACGACAGC
CCAGAACTCA CACTGGCCCT GTTCAGTGCC CCAGCCGGCG CACTGCCTGA CAACGCACCG
GCCTACAACG ACCTCCTCGA TGACCTCGCC ACCGCAGGTC GCCCAGAACT GGCCGCAACC
ATGCACGCCG TCGGTCCCCG CTACTTGACC GACCTCACCA CCACCGACAT TGATGTGCTG
CTCACCACCG CAGACGCACT GCGCACCACC CACCCAGGTG ACGCCGCATA CCTCCTCCTC
GACGCAGCCG ACATCCTCAC CGCAACCGAC CCTGCGCGTG CCCACAGCCT CGCAACTGAC
GCCCACACCC TCATGACCGG GCAAGCAGGA CGCTACAAAA CTGCGCTCAT GGCTGCCGGA
ACCGCACTGA ACAACGGTGA CGCAGACACC GCATCGACAC TCCTGGCACA AGCCGAACCC
CTCGCGTACG GAAACCACCG GCTCGACACA CACGCGACCT TCCTGCGCGC CACGCTCGCG
ATCCACCACA ACGACTGGGC CACCGCACTC AGCTGCTTCG ACCAAGCCGC TACCACTGCA
CTGAGCCACA ACAACGTGAC CGCGGCCTGG CAACTCCTTG CCCGCAAAGC CACAATCCAC
ACGACCATCA ATCAGCCCAC AGACGCTGCC CGCACCCTAC GGCAAGCACT GCGTCACGCC
GACACCGCAC AGGTCGACCA GCCCACCCGC ATCTCACTGA CCGGTGACCT AGGTCGAGCA
CTCCTGGCGG CAGGGCACCC ACACGACGCA ATCGGGCACC TCAGCGAAGC TCTCGACTGG
CACATCACCA ACGACAGTGC CCCCGACGTT GTTCTTGAAC TCCTCCACAC CCTCGGGGAA
GCAGGGTATG CCAGCGGTCA CGCCCAGCAG GCATTCTCCG CCTGGATGTA CGCCCTCAAC
TACGCTGAAG AACACAACCA ACCCACCATC CAGTACACCA CCGCTATCCG GCTCGCCGAC
TTCCTCACGG AAGTCGAACA CGAAGACGCC CCCACCTACG CCGCCCAAGC CATGGCACTG
GCCACCGAAC ACGGAGAACC ACTCGCCGTG GTGCAAGCCG CGAAACGGGT CGCCACCGCG
AACGTTGCAA TCACCAGATC CGCGGACCTG AGCGCACTAG ACCATGCAGA ACAAGCCCTC
GACGCCGCCA CTGTCAGTGA AGCCGACCAA ATGATGGCCC GCATCGAACT AGGTATGCAC
CGGGCTCAAC TGTTGTGGCG CATGGACCAC AACGCTGACG CAATCGCAGC CGCCCACCTC
GTCGCCGACC TTGCCCGGTC CGCTAACGTC ACCCCAGCCG TTGTTGATGC GCTGACCATC
ATGGGCCTCG CGCACCGAGA CGCAGGCGAA CCACACGACG CGCGTGCCCG CCTTAGTGAA
GCCCGCGACC TGATCACCGC AGACTCCACC AAGGATGGGC ACACCGCAGA AGACGCGCAC
GCACACAGCG AACAGATCAC ATTCCTCACT GCGCAGATTG AGGCCCTTAA TGACACAGCC
CAGTCATAG
|
|---|
| Protein sequence | MRLETPPPAL QDLIDQARAM PLGREERDVV RQALTMAEEL HLDGWAYLLR LWFNRSCFMV
GDTDALLTSF TRSLAIHDSN PERFPLSVDE DTHLLFQYKW VADLLNDSPA YSLTQITQIY
NDMERRYQQA GVSPSGYLQT RFGGACDRGE WDDAEHYFAQ LQATPRDDLS HCDACSRSTA
ALYYRDKGDT QRARELLQEI FDGNFMCGDE PEYSETQAMF LALRDNDLES ARFLHHKSLT
AIRAKEEPGS MLLAHVDFCV LTGNTPRAVA LVEQFPRVFD TSPLNVARQF HCLTTLAVLA
DAMIADGHGD LPIRGTSAPH FARLLGLAHH DGTPTRDLTP HDISAPTWQQ ARTHADAFNA
RNNTSHYDTL YANARARREE RWDLPLGIDE YHTPVSTPVA PTPVSVLDHV AAIYNTITTQ
PDQALTHYQA SRDLPTTDDS PELTLALFSA PAGALPDNAP AYNDLLDDLA TAGRPELAAT
MHAVGPRYLT DLTTTDIDVL LTTADALRTT HPGDAAYLLL DAADILTATD PARAHSLATD
AHTLMTGQAG RYKTALMAAG TALNNGDADT ASTLLAQAEP LAYGNHRLDT HATFLRATLA
IHHNDWATAL SCFDQAATTA LSHNNVTAAW QLLARKATIH TTINQPTDAA RTLRQALRHA
DTAQVDQPTR ISLTGDLGRA LLAAGHPHDA IGHLSEALDW HITNDSAPDV VLELLHTLGE
AGYASGHAQQ AFSAWMYALN YAEEHNQPTI QYTTAIRLAD FLTEVEHEDA PTYAAQAMAL
ATEHGEPLAV VQAAKRVATA NVAITRSADL SALDHAEQAL DAATVSEADQ MMARIELGMH
RAQLLWRMDH NADAIAAAHL VADLARSANV TPAVVDALTI MGLAHRDAGE PHDARARLSE
ARDLITADST KDGHTAEDAH AHSEQITFLT AQIEALNDTA QS
|
|---|
| |