| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2451 |
|---|
| Symbol | |
|---|
| ID | 8381604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2628607 |
|---|
| End bp | 2629761 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645005216 |
|---|
| Product | SCP-like extracellular |
|---|
| Protein accession | YP_003162386 |
|---|
| Protein GI | 256833659 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.645872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0150957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGC ACTCCATCCG CCGCACACTC ATCGCACTCG CATGTGCACT GGCAACAACC
GCAACCACCC TCGCAGCCGC ACCGGCTGCG ACCAGCACAA CCGCATCGAC AGGTGTGACA
CCCGCCGTCA CCACAGCGGT TCAACTCGAC GCGCTCTCCC AAGCAATCGT CAACGAAACC
AACAAAATTC GCGCAGCACA CGGACTGAAA AAAGTCACTG TCAACACCAA AGCCACCCAA
GGCAGCGCAC AATGGGCCGG GTTCCTCGCC TCAAAAAACC TGCGCGCGGA CATGTACCAC
GACCCTCAAC TCTTCACCAC CACCGCAACC TCAGCAGCCA CCCGCGCCGG GGAAAACATT
CTCTACACCT CCGGAAGCGC GGACGCCGCC CGTTTCCTTT CCCTGTGGAT GAACTCTCCC
GGGCACCGGG CCAACATTTT GCGCCCCGAA TGGACCCACA TTGGGGTTGC CTGGGACCGC
AACTCTGACG GCACCTACCT GTACGCCGTC CAACGGTTTG TCGCCTACCC AAGCTCGGCC
ACCACCCGAA CAGCCACCCC ACAAAAAACG CGCATCGCCG GGTACAACAC GTCAAAGAAA
ACCATCACCG TGGGGCAAGC CGCACCCAAA GACGTCGTCG CAGTGTCAGC CCGCAACGGA
AAAATCTCGT TGCAACGCAA AACCAACGGG ACGTGGAAAA CCGTGCGCAC CGTAGCCGTG
AAAACCTCCA ATGGGAAAGC GGCGATTCTC TACCCCACCC ACAAAACCGC AGGAACCTAC
ACCTACCGCA TCCGGTATGG CGGGTCCTCC ACCCACAAAG CAGCAGTCTC AGCGACAAAG
AAAGTCGTGG TCCGCAAGAA AACCCAAAAA ATCACGGGAT ACAACGCCTC CACTCGGTCC
ACCGTGAAAG GGCGAGTCGC CGCACCACGT GACGTGGTTA CGATCTCCAC GAAACGAACT
GTTGCTCTCC AACTGAAAAA AGGGGGCACC TGGAAGACCG TGAAGAGATT CACACCGAAC
TCTCGCACCG GCAAGGTGGG GGTCACCTAC CCCAAAGTCA CCCGCACAGG GACCTACACG
TACCGGCTCA AGGTCGGGTC AACCAAGACC TACAACGCTG TCACCACCCG AGCAAAAACG
GTCCGGGTGC GCTAA
|
|---|
| Protein sequence | MVKHSIRRTL IALACALATT ATTLAAAPAA TSTTASTGVT PAVTTAVQLD ALSQAIVNET
NKIRAAHGLK KVTVNTKATQ GSAQWAGFLA SKNLRADMYH DPQLFTTTAT SAATRAGENI
LYTSGSADAA RFLSLWMNSP GHRANILRPE WTHIGVAWDR NSDGTYLYAV QRFVAYPSSA
TTRTATPQKT RIAGYNTSKK TITVGQAAPK DVVAVSARNG KISLQRKTNG TWKTVRTVAV
KTSNGKAAIL YPTHKTAGTY TYRIRYGGSS THKAAVSATK KVVVRKKTQK ITGYNASTRS
TVKGRVAAPR DVVTISTKRT VALQLKKGGT WKTVKRFTPN SRTGKVGVTY PKVTRTGTYT
YRLKVGSTKT YNAVTTRAKT VRVR
|
|---|
| |