| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2380 |
|---|
| Symbol | |
|---|
| ID | 8381535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2545413 |
|---|
| End bp | 2546366 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645005142 |
|---|
| Product | MaoC domain protein dehydratase |
|---|
| Protein accession | YP_003162317 |
|---|
| Protein GI | 256833590 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.087809 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGC CTCCTTTGTC CCCTGCGCAG CGTCCAGCGG TGTCCCGTTC CTTGGCGCGG
GTTCCCTCGT TGACGTCCTT GTATGTTCAG GCGTTGACGC CACGAGTGGA CACGGTGACC
CGGTTGGCAT CTCGTCTGCG ACGTGATGCG CCTCATGCCA CGGTTGAGCA CCGTTCTCTT
CCGGAGGTCA CGTACGTGGT TGATGGTGTG CGTGGCGACC CGGTGGAGGT GGCCCGCTAT
TGCACGGTGG TGGGTGCTGC ACGGTCTGAG GTGATGCCTG CCGGGTACGT TCATGTTCTT
GCGTTCCCTG TGGCGATGGC GTTGATGGTG TCTGCGCAGT TCCCGCTTCC AGTGGCGGGG
ATGGTGCATG TGGCGAACTC GGTGGAGGTG GCTCGCCCTG TTCTTGTGGG TGAGACACTG
ACTGTTGCTG CCTGGGCACG CAACCTTGCT GAGCACGCGA AAGGAACCCA GGTTGACCTT
GTCACTGAGG TCAGCGTGCA GGGGGAGGTG GTGTGGCGGG GTGTGTCCAC CTACCTGGCT
AAGGGCACGT TTTTGCGCGG CCGGGGTGAA GTTCGCACAC CAGATCCGTT TGTCCCGCCT
TTCCCTACTG GGTCATGGTC GCTTCCGGCG TCCCTTGGCC GGGACTACGC CGCCGTGTCT
GGGGATCGTA ACCCTATTCA CTTGTCCGCG TTGACGGCGA AACCTTTTGG GTTCCCGTCT
GCGATCGCTC ACGGCATGTA TACGTCGGCG CGGGCGTTAG CGGAGGCTGA CCCGCTCGTG
GGTGACCGTT TCCGGTGGAC GGTGACGTTC GCGAAACCGG TGCTGCTGCC TGGCCGAGTG
TCGGTGGCGA TCACTCCTCA CGGCGAGGGG AGGCAGGGGG CTGAGTATGT GGGCTGGAAT
CCGAAGAACG GCACGCTGCA TTTCCGTGGG GATATCACCG CGCTTGACGA GTAG
|
|---|
| Protein sequence | MMQPPLSPAQ RPAVSRSLAR VPSLTSLYVQ ALTPRVDTVT RLASRLRRDA PHATVEHRSL
PEVTYVVDGV RGDPVEVARY CTVVGAARSE VMPAGYVHVL AFPVAMALMV SAQFPLPVAG
MVHVANSVEV ARPVLVGETL TVAAWARNLA EHAKGTQVDL VTEVSVQGEV VWRGVSTYLA
KGTFLRGRGE VRTPDPFVPP FPTGSWSLPA SLGRDYAAVS GDRNPIHLSA LTAKPFGFPS
AIAHGMYTSA RALAEADPLV GDRFRWTVTF AKPVLLPGRV SVAITPHGEG RQGAEYVGWN
PKNGTLHFRG DITALDE
|
|---|
| |