Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2228 |
Symbol | |
ID | 8381386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2414505 |
End bp | 2415716 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645004988 |
Product | glycoside hydrolase family 5 |
Protein accession | YP_003162168 |
Protein GI | 256833441 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATCTG CACGAGCAAT CGCCGCCGCA CTCGCACTCG CGAGCACGGC AGCATTCACC GCCCCCGTCA GTGCCGCATC GGCAGCCACA CCCGACGGAA TCCACGTCAA AGACGGGCGC ATCTACGAAG CTGACGGCAC CGAACTCATC CTGCGTGGCG TCAACCACGC CCACGCCTGG TACAACAACG AAACAGGTGC CTACGCCGAC ATTGCCCACG CCGGTGCCAA CTCCGTGCGA ACCGTCCTCT CCAACGGAGT GACCTGGTCA CGCACCAGCA GCGCAGACGT CGCCCAACTC ATCAGCTTGT CCGAAGACGC CCAACTCATC AACATGCTCG AAGTCCACGA CACCACCGGC TACGGCGACT CATCCCTGGA CTCCCCCCGA TCCACCCTCG CCCAAGCAGC GGACTACTGG ATCAGCCTCA AAGATGTCCT GGTCGGTACC GAAGACCACG TCATCATTAA CCTGGGCAAC GAACCATTCG GGAACAACGA CACCACCAAT GCACGATACG TCAACGACAC CACCACCGCG ATCACACGAC TACGCAACGC CGGTCTCACC CACACCATCG TGGTGGACGC CCCCGGCTGG GGCCAAGACT GGCAACACAT CATGCGCGAC AACGCCGCCA CCATCCTCAA CGCTGACCCA CTGAAGAACG TGGTGTTCTC CGTCCACATG TACGAGGTCT ACTCCTCCCC GCAAACCGTC AAGGACTACA TCAACTCCTA CCGGTCCCGC GAGCTCCCCC TCATCATTGG AGAGTTCGCC TCCACCCACT TTGGTAAACC CGTCGCCTGG GAAACCATCC TGAACGAATC AACAAACAAA GGAATCGGAT ACTACGGGTG GTCCTGGTCA GGCAACGGCC CCGGTCTTGA AGCACTCGAC ATCGTCAACA ACTTCAACGG ATCCTCACTA ACCACCTGGG GCAAACAACT GTTCACCTCG CCCCACGGCA TCGCAAAAAC AGCCACAACT GCGTCCTACT TCACCGGCTC AACCGGTGGA AACAACGGCG AGTACCCCAC CTGCGCCAGC GCGTCATCAG ACCCCGACGG GGACGGCTGG GGCTGGGAAA ACAACCAGTC CTGCATTGTG CCCACCCCAA CGACCTACCC CACCTGCGCC AGCGCATCAT CAGACCCCGA CGGGGACGGC TGGGGCTGGG AAAACAACCA GTCCTGCATC GTGAAACCGT AG
|
Protein sequence | MRSARAIAAA LALASTAAFT APVSAASAAT PDGIHVKDGR IYEADGTELI LRGVNHAHAW YNNETGAYAD IAHAGANSVR TVLSNGVTWS RTSSADVAQL ISLSEDAQLI NMLEVHDTTG YGDSSLDSPR STLAQAADYW ISLKDVLVGT EDHVIINLGN EPFGNNDTTN ARYVNDTTTA ITRLRNAGLT HTIVVDAPGW GQDWQHIMRD NAATILNADP LKNVVFSVHM YEVYSSPQTV KDYINSYRSR ELPLIIGEFA STHFGKPVAW ETILNESTNK GIGYYGWSWS GNGPGLEALD IVNNFNGSSL TTWGKQLFTS PHGIAKTATT ASYFTGSTGG NNGEYPTCAS ASSDPDGDGW GWENNQSCIV PTPTTYPTCA SASSDPDGDG WGWENNQSCI VKP
|
| |