| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2203 |
|---|
| Symbol | |
|---|
| ID | 8381361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2379552 |
|---|
| End bp | 2380745 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645004957 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_003162143 |
|---|
| Protein GI | 256833416 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0681126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTGGT CGTGGTTATG TGGTCAGCGC ACGGGCGAAA AGGCCACCGT GCCCCAGGTG
ACAGACCACC CTCATCCGGA GCAGTCCGCG GTCGTCCGCC AGTGGTCGGA TGCGTTTGGG
CGTCTTGCGA CGCGCGCAGT GCAAACAATC GCTGTGCTGC TCGTGGTGGG GTTGACGCTG
TGGGCGATGG CATACCTCGG GGTGGTGTTT ATTCCCGTGG TGTTGGCCCT CATCATTTCC
TCAGCAGTGT TCCCACTGAT GCGGTGGCTA CGCGCCCGCG GAATGTCCTC CCTACTTGCC
ACCTGGCTGG TGCTGTTCAG TGCGTTCGCT GTGGTGGGAG GACTCCTCAC AGCTATTGTG
CAGGCAGTTC GAAGCCAATG GAGCGACCTG GTCTCCTCCG CCCAAGATGG CTTTGACGAA
CTGTTAGTGC TCCTGGAAGA CCTGCCATTC GAGGTGGACC CTGCCCAGCT AGACGATGCG
AAACAATCAG CCATTGATTT TGTCACCTCA AGCCAATTCG GTTCAGGTGC AGTAGCCGGG
CTCTCTGCCA CCGGCACATT CTTCACCGGG TTTTTCCTCA CGCTCATCAT CACGTTCTTC
TTCATGAAGG ACGGTCCCGC AATCTGGGAG TTCCTGCTGC GCCCACTAGA CGGGCAGTAC
TACGATCGCG CACGCCGCAT TGGTGACCGC TCCGTGCGAA CCATGGGCGA CTACATTCGC
GGAACCGCAA CAGTAGCGGC CGTCGACGCG TTGGGTATCG GCCTTGGGTT GGCTTTCCTT
CAAGTTCCGT TGGCGTTGCC GCTCGCAGTC ATCGTGTTCC TCACCGCGTT CATCCCCTTG
GTAGGAGCAA CATTAGCTGG GTTCCTCGCG GCGCTTGTTG CCTTAGTGGA TGGCGGAATC
TGGCCTGCGC TCGCCGTGGT GGGCATTGTC ATTGTTGTGA ACCAGCTGGA AGGAAACTTC
CTCCAACCCA AGATCATGGG CAAAACACTG AGCTTGCACC CGCTCGTGAT CTTGATTGGG
TTGACAGCAG GAACGATTAT TGGCGGGATC GTCGGGGCTG TGCTGTCCGT CCCGATCGCC
GCTGTGGCAT GGGGGATCCT GCAAGTGTGG GACGGCCCCG ACCAGCCTGC CGCGTTCATC
GCAAAGAAAC CCCGCGAGGA ACGGCTCGAC AACGAGTTAG AGGTGTCCCA CTAA
|
|---|
| Protein sequence | MMWSWLCGQR TGEKATVPQV TDHPHPEQSA VVRQWSDAFG RLATRAVQTI AVLLVVGLTL
WAMAYLGVVF IPVVLALIIS SAVFPLMRWL RARGMSSLLA TWLVLFSAFA VVGGLLTAIV
QAVRSQWSDL VSSAQDGFDE LLVLLEDLPF EVDPAQLDDA KQSAIDFVTS SQFGSGAVAG
LSATGTFFTG FFLTLIITFF FMKDGPAIWE FLLRPLDGQY YDRARRIGDR SVRTMGDYIR
GTATVAAVDA LGIGLGLAFL QVPLALPLAV IVFLTAFIPL VGATLAGFLA ALVALVDGGI
WPALAVVGIV IVVNQLEGNF LQPKIMGKTL SLHPLVILIG LTAGTIIGGI VGAVLSVPIA
AVAWGILQVW DGPDQPAAFI AKKPREERLD NELEVSH
|
|---|
| |