Gene Jden_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2115 
Symbol 
ID8381273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2309788 
End bp2310810 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content58% 
IMG OID645004867 
Producthypothetical protein 
Protein accessionYP_003162055 
Protein GI256833328 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.973096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGAGCA CTTTGGCAAG ATTGTTCTCG ATGTGGCGGG TTCGAGTGGG ACCCACTGAC 
GGGTGGGCTC CGGACGTTCT TGGTCAGGGG TTTTCTCAGC TCACGATGAC TCTGCCCTCA
GATGATGAGG GTGATGTTGT TGCGACCTTG GTGGCCTACC GGCCTGATGG CTGGGAACGA
CGGGCCCGTG CTGTGGTCTA CCTACACGGG TGGAGCGACT ATTTTTTCCA CACGGAGACC
GCACAGTTTT GGCACGATCA GGGTGCCGCA TTTTATGCTG TTGATCTGCG CAAATATGGG
CGGAGTTTAC GGGAGTGGCA AACCCCGGGC TATACAGATT CGTTGGCTGC GTATGCGGCT
GATATTCAAG CGGCTCTCGA TGTGGTTCAT GCTGAACATG GTGCGCACAC CTCGGTCATG
ATCATGGCTC ATTCCACGGG CGGGTTAGTG GCGAGTTTGT GGGCCCACTA CAATCCGGGA
AAGATCAGCG GGTTGATTCT CAATTCGCCA TGGTTGGAAC TTCAGGGGTC TTCGGTGGTG
CGCACGCTGT CCACTCCGGC CCTTCAGCAG TTGGCACGAT TCCAGCCCAA AGCACCGTTG
CCGAACCTTG ATCCAGGGTT TTACGCCCGT GTGATCAACA AAGAGCTTGG TGGGGAGTGG
GAACCAGACG CATCGTGGCG CCCGGTCCCT TCATTCCCGG TGCGAGCAGG ATGGCTCAGT
GCAGTGATTG CCGGTCATGC CCGTGTTGCC CGCAGACTTG ATGTCACGGT TCCTGTCCTC
ATGCTCATTT CCACCAGGTC CACGATCCTG CCACGGTGGA GTGAAGAGAT GCGCTCCAGC
GACAGTGTTC TGGACGTGGA TGTTCTCGCT CGCCGCGCCC CCTACTTGGG TAACAATGTC
ACTATTAACC GCATTGAGGG CGGCATTCAT GACCTAGCCC TGTCCCGCCG CGATGTGCGC
ACCCACTACT ACGACTGTAT CCGGCAGTGG ACCATCGGGT ATGGCTGGTT CGGGGCTCTT
TAA
 
Protein sequence
MGSTLARLFS MWRVRVGPTD GWAPDVLGQG FSQLTMTLPS DDEGDVVATL VAYRPDGWER 
RARAVVYLHG WSDYFFHTET AQFWHDQGAA FYAVDLRKYG RSLREWQTPG YTDSLAAYAA
DIQAALDVVH AEHGAHTSVM IMAHSTGGLV ASLWAHYNPG KISGLILNSP WLELQGSSVV
RTLSTPALQQ LARFQPKAPL PNLDPGFYAR VINKELGGEW EPDASWRPVP SFPVRAGWLS
AVIAGHARVA RRLDVTVPVL MLISTRSTIL PRWSEEMRSS DSVLDVDVLA RRAPYLGNNV
TINRIEGGIH DLALSRRDVR THYYDCIRQW TIGYGWFGAL