Gene Jden_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2089 
Symbol 
ID8381815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2280555 
End bp2281691 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content59% 
IMG OID645004841 
Producthypothetical protein 
Protein accessionYP_003162029 
Protein GI256833302 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGGAAC AAGCCACAGC GGCGCGCAGT GTCGATGTTG TTCTGGGAAC CTATCCGAAG 
GATGCAGAAC CAGGATCAGG CGAGGGGATG TGGTCTGCTC GGTTTGATCG AGTGACAGGT
ACTATCAGCG ATCTCCGCCA GGTCGCTCAG GTTGCTGCGC CGTCGTTCTT GGCCACGACT
GTGGTGTCTA ATACACGCAT GGTGTACGCG GTGTCTGAGG TTCCCACTGG GCAGGTGCAC
GGTTTTGCTC TGCGTGAGGG CGGCGTCGAG CAGCGGGGTG TTGTCGACAC AATGGGGTCA
CAACCGTGTC ACGTTGTTGT TGACGGTGAC GGGGTGTTGG TGGCGAACTA TGGAACCGGA
TCGGTGGCAA CGTTCCCGGT TGGTGAGCAC CTGACGAAGG AGACGCCGGT TGCTCTTTTT
CAGCATTCGG GTAGTGGCCC CCGTCCTGAT CGTCAGGAAG GCCCCCATGC ACACTACGTG
ACTTCTGTTC CTGCTACCCA ATACATGTGG GCGGTTGATC TCGGGAGCGA CGCAGTGTTC
TTGTATGAGG GAATCGTCAA ACCGGATGGA ACCCGCGGGT TTGCAGCTCG GGGAATTGCG
GTGGACTTGC CAGCGGGTAC TGGGCCACGC CATGTGGCGT GGGACGACCG TGGATTGGCG
TATATTGTCG GTGAACTTGA CCGCCATATC ACTGTGGTTC GCCCACATTT GAGTGACGGG
TCAGGGACAA TTCTTGGCCG CTTCCCATGC GGTGATTGGG ACACAGGGCG CGAAGAGGAG
AGCGAGTCTC TTCCCTCACA TATTGCGATG AGCACATCAG GACGCAGAAT TTACACGACT
GTGCGCGGTC GAGACATGCT GTTGTTCTGG GATCTGCCTG AGCTCGGTGA AGCCATGGAC
GAGGCGGATG GTGAGAATGC AGACGTCATT CCGTGTCTGC GAGGGACGTA CCGGCTGGCA
GGTCATTGGC CTCGCCATTT TGCTGTGGTC GCGGCGGACG ACGGTGGCGA TTTCCTTCTG
ATTGCTCAGC AGGGATCCCA CGAGATTGAA GTCCTTCATG TGGCCACCGA CGGGGTAGTG
ACGCAACGGC AGAGCGCACC GATTCCTGCC CCTGCGTGTG TTGTCGTGGT GGACTGA
 
Protein sequence
MMEQATAARS VDVVLGTYPK DAEPGSGEGM WSARFDRVTG TISDLRQVAQ VAAPSFLATT 
VVSNTRMVYA VSEVPTGQVH GFALREGGVE QRGVVDTMGS QPCHVVVDGD GVLVANYGTG
SVATFPVGEH LTKETPVALF QHSGSGPRPD RQEGPHAHYV TSVPATQYMW AVDLGSDAVF
LYEGIVKPDG TRGFAARGIA VDLPAGTGPR HVAWDDRGLA YIVGELDRHI TVVRPHLSDG
SGTILGRFPC GDWDTGREEE SESLPSHIAM STSGRRIYTT VRGRDMLLFW DLPELGEAMD
EADGENADVI PCLRGTYRLA GHWPRHFAVV AADDGGDFLL IAQQGSHEIE VLHVATDGVV
TQRQSAPIPA PACVVVVD