Gene Jden_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2057 
Symbol 
ID8381216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2245543 
End bp2247006 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content62% 
IMG OID645004809 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003161998 
Protein GI256833271 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.548507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTGG TTGTTGTGGG CAGCGGCCCC AACGGGCTCG CTGCCGCAGT GACCTGCGCA 
CGGGCGGGGT TGTCCGTTGT GGTGCTGGAA GCCAACGACA CAGTTGGTGG CGGGGCCCGC
ACCGTCGATC TTGGACTGAT GTCGGGGATG CGACATGACC TGTGTTCCGC CGTGCACCCA
ATGGCTGTTG CGTCCCCGTT TTTTGTCGAG TTTGATTTAG CAGCTCGCGG TGTGGTCCTG
CATGAACCAG AGGTTCAGTA CGCCCAACCA CTTGATGCAC GTCGCGCTGC CGTTGCCTAT
CGCAGCCTTG ATCGTACTGC TCGCGAGTTG GGCGGTGATG ACGGCGCGTG GCGGGCGTTG
ATGGAGCCTC TTGCCTCCCG CCCAGATGCG GTGATTGCTG CTGCGCTCAG TGATAAACGG
TCTCTTCCCG CACACCTGTT GTCCCGTGCG TGGGGGATGG CCTCGTTTGG GGCTGCTGTC
GTGGAACAGG GAAGTCCACT GTGGAATGCG CGGTTTCACG GTGATGCTGC TCCTGCGTTA
TTGACCGGGG TGGCGTCGCA CGCGATTTCT CCGCTGCCGT CGTTTGCAGG TGCTGGTACT
GCTCTGATGT TGGGGGCGTT GGCACACAGT CATGGGTGGG TGATCCCTCA GGGTGGGTCC
CAGGTGATTG TCGATGCGCT TGTTGCTGAT CTTGTGGCGC ACGGTGGCAG GGTGGTCACT
GGGTGCCGGG TGGTGGAGCG TGGCGATCTA CCGAGGGCGC GGTCTGTGGT GTTTGATACG
ACCCCGCATG CGGCGTTGTC GATTGTGGGG GATGCTGTCC CTGCTCGGTT GCGGCGCGCA
TTGGAACGGT TTCGGTATGG AAATGCTGCA GCGAAGGTTG ATTTTGTGGT GAGTGAGCCA
ATCCCTTGGG GGGACTCGCG GATGCGGGGG GCAGGGACTG TGCATGTGGG GGGTACCCGT
GGTGAGATGG TTGCCGCTGA GGCTGCCGTG GATCGGGGTG TGGTTCCAGC TTCGCCGATG
GTGTTAGTTT CTGACCCTGC GGTTGCTGAT CCGTCCCGTG CGGTGGCGGG CCACCGACCA
GTATGGTCGT ATGCGCATGT GCCGCGTGAT AGTGAGGTTG ATCCGACGGA CCTGGTGATC
GCGCAGATCG AACGTTTTGC GCCGGGGTTC CGGGACACGA TTGTTGCATC GCAGGCGATC
CCTGCATCAC AGATGTCGGC CCATAATGCC AACTATGTGG GTGGAGATAT TGCAGCGGGG
GCTGCCACGA TGTGGCAGAT TATTGCTCGC CCTTCCTTGT CGCGGGATCC GTATTCGTTG
GGGGTGGCAA GAATGTGGTT ATGTTCGTCC TCGACCCCGC CGGGCCCAGG CGTGCACGGG
CTGGGCGGAT GGTTTGCGGC GCAGCGGGTT CTTGCCCAGG ATTTCGGGGT GATGACGCCT
CCTTCGCTGG CCCCGTCACG CTGA
 
Protein sequence
MDVVVVGSGP NGLAAAVTCA RAGLSVVVLE ANDTVGGGAR TVDLGLMSGM RHDLCSAVHP 
MAVASPFFVE FDLAARGVVL HEPEVQYAQP LDARRAAVAY RSLDRTAREL GGDDGAWRAL
MEPLASRPDA VIAAALSDKR SLPAHLLSRA WGMASFGAAV VEQGSPLWNA RFHGDAAPAL
LTGVASHAIS PLPSFAGAGT ALMLGALAHS HGWVIPQGGS QVIVDALVAD LVAHGGRVVT
GCRVVERGDL PRARSVVFDT TPHAALSIVG DAVPARLRRA LERFRYGNAA AKVDFVVSEP
IPWGDSRMRG AGTVHVGGTR GEMVAAEAAV DRGVVPASPM VLVSDPAVAD PSRAVAGHRP
VWSYAHVPRD SEVDPTDLVI AQIERFAPGF RDTIVASQAI PASQMSAHNA NYVGGDIAAG
AATMWQIIAR PSLSRDPYSL GVARMWLCSS STPPGPGVHG LGGWFAAQRV LAQDFGVMTP
PSLAPSR