| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2027 |
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| Symbol | |
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| ID | 8381186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2216789 |
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| End bp | 2218393 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004779 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_003161968 |
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| Protein GI | 256833241 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.506682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGC AGATCACCAA CGTTTTTACG CGACTGTTCT CCGCGATCCG AGAGTTTACG
GTCGCTCAGC GCACCCTGGC ACTCATTGGA CTTGCCGGTG TCATCGTCGC GTTAGTGGCG
CTTGCCATGT GGGCCACGCG GCCACAAATG CAACCGCTGT ACACCGACCT CGCCCCAGCC
GATGCAGCTG CGATCGTTGA CCAACTCGCC GCGAATGGGG TGCAATACCA GCTCACCAAC
GGTGGGTCCA CCATTCTTGT TCCTTCTGGA CAGGTGTATG ACCAGCGCCT CAAGGTTGCG
TCCTCAGGGA TCAGTCCCTC AGCGGAAGGA GGCTACTCGC TGTTGGACAA CATGGGAATG
ACCTCCTCGG ACTTCCAACA AAACGTCACC TATAAGCGTG CACTTGAGGG TGAAATCGCG
AAGACCATTA CCGCGATGAA CGGCATTGAG GTCGCATCTG TGCAACTAGC CATGCCCGAA
GACACTGTGT TTGTCTCCCA AAGCGCAGAC CCCACAGCAT CAGTCTTTGT GAAACCCAAA
GCAGGGGTCA CCCTTGCAGA TGACCAAGTC GCTGCCATCA CCCAGTTTGT CTCCGCCGCA
GTAGAGGGCA TGAAAGTGGA GAATGTCGCG GTGATCGACT CCGACGGGCA AGTGCTCTCC
GCAATGGGCG GATCAGGAAC TCACGGAACG AACCTCAAAG AAACCCAACA GTACGAACAG
CGTATTGCCG CCTCCCTGCA AGGGATGCTC GACCGAATCT TGGGTAACGG GATGGCAGTG
GTCTCAGTGA CCGCCGAACT TGACTTCGAC GCGACTGAGC GTGTGAGTGA GTCCTATGAT
TCTAACGAGG ACGCCCTGCC CCTCACTGAA CGAGAAACCA CTGAGGAATA CACCGGGACA
GGAAACGCCG CTGGTGTTCT CGGCCCAGAC AACATTGCAG TTCCCGAAGG ACAAACCGAC
GGTAACTACA CGAACACGTC CAGCGAGCGC AACAATGCCG TGGACAAAAC CACCGAACGT
ATTGTCACAG CTCCAGGAAC AGTGCGCCGC CAGTCGGTGT CAGTAGCAGT TGACCAGCAA
GCTGCAGCCA CGATCAACAT CAATGACCTG CAAGCCATGG TGACTGCAGC TGCCGGGATC
GATGAGGAAC GAGGGGACAC CGTCACGGTG ACCCGGATGG CCTTTGATGA CACCACAGCG
CAAGCTGCTG CCGAAGCACT GACCGCAGCA GAAGCAGAAG CCGCTGAAGC TGCCCAGATG
GAGATGTACC GCAACCTGGG AATCGCTGCG ATCGCTCTGG TTTCCATCAT CGCGTTGAGT
ATTGTTGCTG CTGCCCGTCG TCGCCGCAAC CGGATGCCGC AACAGGTGGA ACAAGAGGCA
CTAGACCTTG GTGAAGTGGA GCTAGCTCCG GTCCCAGCGT ACAACGCAGC TGCGGAACTG
GAACAACTAG AGTTCCCAGA AATGCCGGAA CTTCCTGCCG CCCCCGATGA CAAAGCGTTG
CGCGCCGAAA AGAAGCGCCA AGACGTGGTG ACCCTCGCGG ATGAAGACCC CAAGCAAATG
GCGGAAATCC TCAACGAGTG GATTAGCACG GGAGGTCGGT CATGA
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| Protein sequence | MPQQITNVFT RLFSAIREFT VAQRTLALIG LAGVIVALVA LAMWATRPQM QPLYTDLAPA
DAAAIVDQLA ANGVQYQLTN GGSTILVPSG QVYDQRLKVA SSGISPSAEG GYSLLDNMGM
TSSDFQQNVT YKRALEGEIA KTITAMNGIE VASVQLAMPE DTVFVSQSAD PTASVFVKPK
AGVTLADDQV AAITQFVSAA VEGMKVENVA VIDSDGQVLS AMGGSGTHGT NLKETQQYEQ
RIAASLQGML DRILGNGMAV VSVTAELDFD ATERVSESYD SNEDALPLTE RETTEEYTGT
GNAAGVLGPD NIAVPEGQTD GNYTNTSSER NNAVDKTTER IVTAPGTVRR QSVSVAVDQQ
AAATININDL QAMVTAAAGI DEERGDTVTV TRMAFDDTTA QAAAEALTAA EAEAAEAAQM
EMYRNLGIAA IALVSIIALS IVAAARRRRN RMPQQVEQEA LDLGEVELAP VPAYNAAAEL
EQLEFPEMPE LPAAPDDKAL RAEKKRQDVV TLADEDPKQM AEILNEWIST GGRS
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