Gene Jden_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2017 
Symbol 
ID8381176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2208307 
End bp2209092 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content58% 
IMG OID645004769 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003161958 
Protein GI256833231 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.358452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCCG CATCACTCAT CGGACTTGCC ATTGGTTTTG GTGCCATCAT CATGGCGATC 
CTCCTTGAGG GCGCCTCCCC GATGTCTGTG TTCCTCCCCG CACCGATGGT TCTTGTGTTC
CTCGCAACCT TTGGTGTGGC CATGGCAGGG GGGACCTTGC GTGACACGAT CTACGCACTA
AAACAGCTTC CCGCGGCCTT CACTCGCAAA CCCTCGAACG CCGCCGCCTC AGTGGACACC
ATCGTGTCAC TGGCAGAACA AGCCAGGCGT GAAGGTCTCC TGGCGCTCGA AGACGCGGCA
AAAGACATTG AGAACGACTT CCTGCGTGAT GGTCTGAGAT CCGCTATTGA CGGAACAGAC
CCAGAAGACT TGCGAGACAT CCTCGAAGAC AAAATCGCCG CAAAACGCGC CGAAGACAAA
GTGGGATACA AGTTCTACGA CGACATGGGC GGTTACGCGC CAACTATCGG TATCGTCGGA
ACGGTTGTCT CCCTGGTCCA CGTGCTAGAA AACCTCGCGG ACCCCTCCGA ACTGGGGCAC
ATGATCGCCG CAGCGTTCCT GGCAACATTC TGGGGAATCT TCACCGCGAA CGTCATGTGG
TTGCCGATCG GGAGCCGCCT GAAGCGGATC TCTAACCTTG AGTGTGACGA AATGGAAATC
ATCCTCGAAG GTCTTCTCGC CGTTCAAGCA GGGTCCAACC CGCGTCTTGT GGGTGAACGC
CTGCGCTCAC TGATTCCCTC AACGAGCGCA CCACCAGCAC CCAAAGTGGC GAAGGAAGCG
GCATGA
 
Protein sequence
MDPASLIGLA IGFGAIIMAI LLEGASPMSV FLPAPMVLVF LATFGVAMAG GTLRDTIYAL 
KQLPAAFTRK PSNAAASVDT IVSLAEQARR EGLLALEDAA KDIENDFLRD GLRSAIDGTD
PEDLRDILED KIAAKRAEDK VGYKFYDDMG GYAPTIGIVG TVVSLVHVLE NLADPSELGH
MIAAAFLATF WGIFTANVMW LPIGSRLKRI SNLECDEMEI ILEGLLAVQA GSNPRLVGER
LRSLIPSTSA PPAPKVAKEA A