Gene Jden_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2014 
Symbol 
ID8381173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2205850 
End bp2206776 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content59% 
IMG OID645004766 
Productflagellar motor switch protein FliM 
Protein accessionYP_003161955 
Protein GI256833228 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCAT CTGACACCTC GACGGCACGA CGCCACCGAA AAGGGCCCCC GGAACGGTAT 
GACTTCCGGC GGCCCATGAC GATCGCGCGT GAACACGCGA GGATCGTTGA GATGGCGTGC
GAAACATTTG CCCGGCAATG GGCAACCCAA TTGACGTCAC GGTTGCGGGT CATGGCGTCC
ATTGAGTTAG ACAAACTCGA AATGGTCACC TATGACGAGT ACATCGCGAC CCTCGATCCA
CACACGACAC TCGTGCTGTT TACCGCAGAC GAAACTCGCT CCACAGCGCT GTTACAGATT
CCTAGTAACA CCACCATGCT GTGGCTCGAC TATCTCCTTG GTGGGCCGGG GCTCGAACGG
CAAGAAAACC CTCGCGAACT CACTGAGATT GAGACTGCGC TGTTCCGGTC GCTGCTTGAT
TCATCTCTTG CGGACATGAG GTATGCGTTC TCCTCGATCA CCCCGATGAA CCCGAAAATC
CGCGGTCTGC AGTACAACCC GCAATTTGTT CAGGCGGTCC CGGCTTCCGA AGCGGTCCTT
GTGGCGAACT ACTCCCTGAC CGTCGGTGAC CGAGTGAGCG CTGCAACCAT GATGTTCGCA
GCCGATGCCC TGCTCAACCC GCTGAAAGTT GGCGAAGGTG AAGCTGACCC CAGTGCCGCG
CAACGCGAAG AGCAGCGTGT GTCCTTCGAA CGGTTACGAC TGTCCATGAA CGATGTCCCC
GTCGATGTGG GGGTGCGGTT CAACTCCATC ACCGTGCGCC CGCGCGACAT TATCGACATG
GCTGTGGGCG ACGTCATCGA ACTGCGGCAT GCCGCGTCAA AGCCCCTCCG AATTGTCGTC
GAAGGCCGCA CGATCGGTCA CGGCGTCCCT GGTAATAACG GTAAACAACT GGCCGTGAAG
GTCACCGACA CCCACCGAGA GTCCTGA
 
Protein sequence
MTASDTSTAR RHRKGPPERY DFRRPMTIAR EHARIVEMAC ETFARQWATQ LTSRLRVMAS 
IELDKLEMVT YDEYIATLDP HTTLVLFTAD ETRSTALLQI PSNTTMLWLD YLLGGPGLER
QENPRELTEI ETALFRSLLD SSLADMRYAF SSITPMNPKI RGLQYNPQFV QAVPASEAVL
VANYSLTVGD RVSAATMMFA ADALLNPLKV GEGEADPSAA QREEQRVSFE RLRLSMNDVP
VDVGVRFNSI TVRPRDIIDM AVGDVIELRH AASKPLRIVV EGRTIGHGVP GNNGKQLAVK
VTDTHRES