Gene Jden_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2011 
Symbol 
ID8381170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2203612 
End bp2204442 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content57% 
IMG OID645004763 
Productflagellar biosynthetic protein FliP 
Protein accessionYP_003161952 
Protein GI256833225 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACA CACACGACAC TGCGGTTTCC CCCGCACGTC GGTGGATCGG CCGCGCGCTT 
CTGCTCACCG CAGTTGTTCT TGCGCTCGCC CTCACACACC TTGTCTTGAC TGCCACCGGC
GCGCACGCGG ACCTTGTCGA TCCGGCTGAC CCAGCTGCGC CAGTTGATGA CGGTATTTCC
ATTGACATTG GTGGAGGCGG CGATGGTCCT ACCTCCTCTA TTGTTGTGCT CCTGGGTATC
ACGTTGCTGT CAGTGGCGCC TTCGCTGCTG CTGCTCATGA CAAGTTTCAC GAAGATCCTT
GTTGTGCTGT CCATTACCCG CAACGCGCTG GGCCTCCAGT CCGTACCGCC CAACCAAGTA
CTCGCCGGAA TCGCGTTGTT CCTCTCGATT TTCATCATGG GGCCGGTCCT GACCTCGATC
AATGACATTG CGGTGCAACC ATTCCTCGCC GGTGACCTTG ACTTTGCTGG TGCACTGGAC
CAAGGGTCAG GACCACTGCG AGATTTCATG CTCGCGCACA CGCGAGAATC TGATATTGCG
TTAATCACGA GGGCTGCCGA GGCGGAAAAC CCCGCCGACC CCCAGTCTGT TCCGCTGATG
ACGCTCATTC CCGCGTTCCT TCTGTCTGAG TTGCGTGCCG CATTCATCAT TGGGTTTGTC
ATCTTCCTGC CCTTTCTTGT GATTGACCTG GTGATCTCCG CATCACTGAT GTCTCTGGGA
ATGATGATGC TCCCACCGAT CATCATTTCG TTGCCGTTCA AGCTCCTACT GTTTGTCCTT
GTCGATGGCT GGTCGCTGAT CGTGACCGCG CTCATAGGCA GTTACCGGTA A
 
Protein sequence
MQHTHDTAVS PARRWIGRAL LLTAVVLALA LTHLVLTATG AHADLVDPAD PAAPVDDGIS 
IDIGGGGDGP TSSIVVLLGI TLLSVAPSLL LLMTSFTKIL VVLSITRNAL GLQSVPPNQV
LAGIALFLSI FIMGPVLTSI NDIAVQPFLA GDLDFAGALD QGSGPLRDFM LAHTRESDIA
LITRAAEAEN PADPQSVPLM TLIPAFLLSE LRAAFIIGFV IFLPFLVIDL VISASLMSLG
MMMLPPIIIS LPFKLLLFVL VDGWSLIVTA LIGSYR