| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1976 |
|---|
| Symbol | |
|---|
| ID | 8381136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2172572 |
|---|
| End bp | 2172925 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645004728 |
|---|
| Product | toxin secretion/phage lysis holin |
|---|
| Protein accession | YP_003161918 |
|---|
| Protein GI | 256833191 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4824] Phage-related holin (Lysis protein) |
|---|
| TIGRFAM ID | [TIGR01593] toxin secretion/phage lysis holin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCG ACACGATACT GGGTAGCACC GACCTTGTGA TGAGCGGGGT GGGAGGGTGG
TTTGGCGGGT TCGATGGGTT GTTTCATGCC CTCGTCGCCT TTGTTGTCGC GGACTATGTT
TCTGGTGTTC TTGCAGCGGT TAGTGAGCGC AGGCTCAGTT CTTCTGCAGG GTTTCGTGGT
ATCTCACGCA AAATACTTAT CTTCACGTTT GTGTGTTTCG CGCACGTGCT GGATGCCTAT
GCTCTGGGTG GTTCTGGGGT GCTGCGCACA GCAACGATCT TCTTCTATAT CTCCAACGAG
GGTATCTCGT TGATCGAGAA TGCCACCCGT CTTGGGTTGC CTGTACCCGC TTGA
|
|---|
| Protein sequence | MGTDTILGST DLVMSGVGGW FGGFDGLFHA LVAFVVADYV SGVLAAVSER RLSSSAGFRG
ISRKILIFTF VCFAHVLDAY ALGGSGVLRT ATIFFYISNE GISLIENATR LGLPVPA
|
|---|
| |