Gene Jden_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1959 
Symbol 
ID8381119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2151071 
End bp2151655 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content58% 
IMG OID645004711 
Productisochorismatase hydrolase 
Protein accessionYP_003161901 
Protein GI256833174 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.723519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG AACTGCGTCG CGCTTTGCTT GTTGTTGATG TGCAACCCAC TTTTTGTGAA 
GGTGGGGCGC TGGGTGTTGT TGGGGGCAAC GCGGTTGCCC ACCGCATCGC TGATTTTGTT
ACCCAACACC GCGATGAGTA CGCCCTGGTG GCAACCACCC AAGATTGGCA CATTGACCCA
GGTGAACACT TCTCTGACAC CCCAGATTTT GTTGACTCCT GGCCACCGCA CGGGGTCGCC
GGGACCGCTG AAGCCGAGTT ACACCCAGCA TTGGCGTCCC TGGCACCCAC GGTCAGTGTG
AAGAAGGGAC AGTATGCGGC CGCCTACTCG GGATTTGAGG GCACCACACC AGACGGTGTC
TCCCTTCGCG ACGCCCTGAC AGAACATGGC ATCACACACG TTGATGTTGT CGGAATCGCC
GAATCACACT GTGTGAAAGC AACCGCCATT GACGCACATG ACGCAGGATT CACTACCCGC
GTTTTTACTG ACCTGACAGT TCCGGTCACC GAAGATCAAG GCGTCGCGGC GCGCGTAACC
ATGTCAGAAC ACGGTGTGGA ACTTGTTCAG GCCACGCCAG TGTGA
 
Protein sequence
MADELRRALL VVDVQPTFCE GGALGVVGGN AVAHRIADFV TQHRDEYALV ATTQDWHIDP 
GEHFSDTPDF VDSWPPHGVA GTAEAELHPA LASLAPTVSV KKGQYAAAYS GFEGTTPDGV
SLRDALTEHG ITHVDVVGIA ESHCVKATAI DAHDAGFTTR VFTDLTVPVT EDQGVAARVT
MSEHGVELVQ ATPV