| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1930 |
|---|
| Symbol | |
|---|
| ID | 8381093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2114848 |
|---|
| End bp | 2115642 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645004684 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003161875 |
|---|
| Protein GI | 256833148 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCG ACATACAGGA CCTCACCGTC ACAACATCAA CCGGTGTGCC CCTCCTTGAC
CGTGTCACAT GGTCTGTCCC TCGCGGTGGC CGGGTAGGCA TTATTGGCGA GTCCGGGTCA
GGCAAGTCCC TCACCGCCGC AGCGGTGATG GGGCTCCTGC CCTCCGGTAT GCTGGCGACA
GGATCGATCA TGTGGGAGGG ACGTAACCTG CTCACATCCT CAGAACGGCA GATGCGCCGC
ATCCGTGGGG CCCGCATCGC CATGGTGTTT CAAGAACCCT TGACCGCACT TGACCCGCTG
ATGACAGTGG GGAAGCAGAT CGCTGGTCCA CTCGCGTTGC ACCGCAATCT GACGGGGCAC
GCTGCGCGCT CGCGGGTGAA GGAACTTTTG GAACGGGTGT CACTGGCTGA CAGTGAACGA
ATTGCCGCAT CCTACCCGTG GCAACTCTCG GGTGGACAAC GCCAACGGGT TGCGTTAGCG
ATGGCGTTGG CTTGCGAACC CGATGTCCTG ATTGCTGATG AGCCCACCAC TGCGCTTGAC
GTGACTGTGC AAGCTGAGAT CCTCGCTCTG GTGGATGAGC TCATCTCGGG CACCACGACA
ACTCTGATTT TTGTGTCCCA CGATTTGCCA GTGATTACCC AGGTGGCCAA CGACATCGTG
GTGATGCGCA ATGGGCGGGT GACAGAGCGG ACAACCACGC AGCGTTTGGT GAGTGGACCG
CGGGAACCCT ACACGCAACA ACTTGTTGAC GCGGCCTCTC GGATGACCGC ACTCCCGAGG
AAGGCACAAC CATGA
|
|---|
| Protein sequence | MTLDIQDLTV TTSTGVPLLD RVTWSVPRGG RVGIIGESGS GKSLTAAAVM GLLPSGMLAT
GSIMWEGRNL LTSSERQMRR IRGARIAMVF QEPLTALDPL MTVGKQIAGP LALHRNLTGH
AARSRVKELL ERVSLADSER IAASYPWQLS GGQRQRVALA MALACEPDVL IADEPTTALD
VTVQAEILAL VDELISGTTT TLIFVSHDLP VITQVANDIV VMRNGRVTER TTTQRLVSGP
REPYTQQLVD AASRMTALPR KAQP
|
|---|
| |