Gene Jden_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1897 
Symbol 
ID8381061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2076048 
End bp2076857 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID645004651 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003161843 
Protein GI256833116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.843455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTCTG TTCAGGCTTC ATCACATTCG CCCTCTGACA CCTCACAACT TCGCATCGGC 
TATGTGCCCG GGGTGACCCC AGCGAAATGG GTCAACCGGT GGGAGCAGCG GCCTGACAGC
ACGTCTCTCA CGTTGGTGCG CCTAGAACCA CACGACAAAG GACGCGCCGC GGCCCACGGA
GAGGTCGATA TGGCCGTGGT GCGCTTACCC GTGCCCGAAG GGATCTTCCA CACGGTTGCC
CTCTATGAAG AAACCACCGT TGCGATCTTC CCCAAAGACC ACCACCTAGC AGCCGCTGAC
CAACTACTCC TCAGCGACCT GAGCGACGAA ACCCTCCTTC AAGCCGCTGA CGACATGATC
CCCTGGCCCG CAACTGCCCC CGGGCACCCC GCAGCCGAAG AACCACCCAC CACTGAAGAC
GCGATCCCCC TCGTGGCTGC AGGTGTCGGC ATCATTGTGG TTCCGCAGTC CCTTGCACGC
CTGTACGCGC GCAAAGACCT TGACTACTGC CCCATTGATG ACGCCCCTCG AAGTACCGTC
GCGCTCGTGT GGCGCGTAGA GCGCGACGAC GACCTCACCC AAGAATTTGT TGGAGTCGTC
CGCGGCCGCA CGCCTCAGTC CTCACGGGGT GTGCGCGCCA CGACCGAAGC AGGTTCCCCC
ACCCGCACTG AACAACCATC GCGAGCTGGA CGGACCCGCC CTCGCGCATC GGCAGGAAAG
AAGACCACCC CTCAACGCCA ACGAGGCGCC ACCTCAAAAC CTCAAGGAAT CACAAGCAAA
GGCAAAGCGT CAGGAAAGAA GAAGCGCTAA
 
Protein sequence
MDSVQASSHS PSDTSQLRIG YVPGVTPAKW VNRWEQRPDS TSLTLVRLEP HDKGRAAAHG 
EVDMAVVRLP VPEGIFHTVA LYEETTVAIF PKDHHLAAAD QLLLSDLSDE TLLQAADDMI
PWPATAPGHP AAEEPPTTED AIPLVAAGVG IIVVPQSLAR LYARKDLDYC PIDDAPRSTV
ALVWRVERDD DLTQEFVGVV RGRTPQSSRG VRATTEAGSP TRTEQPSRAG RTRPRASAGK
KTTPQRQRGA TSKPQGITSK GKASGKKKR