Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1897 |
Symbol | |
ID | 8381061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2076048 |
End bp | 2076857 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645004651 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003161843 |
Protein GI | 256833116 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.843455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATTCTG TTCAGGCTTC ATCACATTCG CCCTCTGACA CCTCACAACT TCGCATCGGC TATGTGCCCG GGGTGACCCC AGCGAAATGG GTCAACCGGT GGGAGCAGCG GCCTGACAGC ACGTCTCTCA CGTTGGTGCG CCTAGAACCA CACGACAAAG GACGCGCCGC GGCCCACGGA GAGGTCGATA TGGCCGTGGT GCGCTTACCC GTGCCCGAAG GGATCTTCCA CACGGTTGCC CTCTATGAAG AAACCACCGT TGCGATCTTC CCCAAAGACC ACCACCTAGC AGCCGCTGAC CAACTACTCC TCAGCGACCT GAGCGACGAA ACCCTCCTTC AAGCCGCTGA CGACATGATC CCCTGGCCCG CAACTGCCCC CGGGCACCCC GCAGCCGAAG AACCACCCAC CACTGAAGAC GCGATCCCCC TCGTGGCTGC AGGTGTCGGC ATCATTGTGG TTCCGCAGTC CCTTGCACGC CTGTACGCGC GCAAAGACCT TGACTACTGC CCCATTGATG ACGCCCCTCG AAGTACCGTC GCGCTCGTGT GGCGCGTAGA GCGCGACGAC GACCTCACCC AAGAATTTGT TGGAGTCGTC CGCGGCCGCA CGCCTCAGTC CTCACGGGGT GTGCGCGCCA CGACCGAAGC AGGTTCCCCC ACCCGCACTG AACAACCATC GCGAGCTGGA CGGACCCGCC CTCGCGCATC GGCAGGAAAG AAGACCACCC CTCAACGCCA ACGAGGCGCC ACCTCAAAAC CTCAAGGAAT CACAAGCAAA GGCAAAGCGT CAGGAAAGAA GAAGCGCTAA
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Protein sequence | MDSVQASSHS PSDTSQLRIG YVPGVTPAKW VNRWEQRPDS TSLTLVRLEP HDKGRAAAHG EVDMAVVRLP VPEGIFHTVA LYEETTVAIF PKDHHLAAAD QLLLSDLSDE TLLQAADDMI PWPATAPGHP AAEEPPTTED AIPLVAAGVG IIVVPQSLAR LYARKDLDYC PIDDAPRSTV ALVWRVERDD DLTQEFVGVV RGRTPQSSRG VRATTEAGSP TRTEQPSRAG RTRPRASAGK KTTPQRQRGA TSKPQGITSK GKASGKKKR
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