| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1863 |
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| Symbol | |
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| ID | 8381027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2040382 |
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| End bp | 2041407 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645004617 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003161809 |
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| Protein GI | 256833082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0199822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGTAC TGGTCACCGG TGGTGCTGGT TTCATTGGAA CAAATTTTGT GCTCTGGCTT
CTTCATACCG TACCGGACGT CCGGGTAACG GTGCTTGACG CTATGACTTC GGCAGTTATG
ACGAATAATT TCATCTATGC GCGGCGCGGA TCTCGTGAAG ATTCAGTGTG GGACCATTTT
GAGTTTGTTC GTGGTGACGT GCGAGATCGA GATGTTCTCT TTCCCCTGGT CAAAGATAGT
GACGTCGTTG TGCATTTAGC GGCAGAATCC CATAATGACT GGTCGCTCGA GAATCCTGAC
CTGTTTGTTG ACACAAATGT GATGGGAACA TTGGCTGTGT TGGAAGCCGT TCGGCACTAC
GGTGTGCGTC TCCATCACGT GTCAACAGAT GAAGTCTTTG GGGATTTACC ACTTGATTCT
GGCGTGTTTA CTGCGACAAG CCCATACCGG CCGTCGAGCC CCTATTCTGC CTCGAAGGCC
GGGGCTGACC ATTTGGTGCG GGCCTGGACT CGCTCCTTTG ACCTCCCGGT GACGCTCTCC
ATCGCCTCCA ACAACTATGG CCCCTACCAA CACATCGAAA AGTTCATACC TCGCCAGGTG
ACAGAACTGC TTGAGGGTCG CCCCATGCGC CTCTATGGGT CTGGTGTCCA TGTTCGTGAT
TGGATCCATG TCAGTGATCA TTGCCGTGCG TTATGGGCCA TTGTGACGGG TGGGGAGCTG
GGGAAAACTT ATCTCATTGG CGGTGCTTGT GAGGTGTCGA ATAGCGATAT TGCGGCGCTT
GTGCTGGACC AGGGAACCTG GAGTCTCCCG GCGTCCGAAG CGGTCGTGCA TGTGGCGGAT
CGCCCCGGGC ACGATGTACG GTACGCACTG GATTCGCGGG AGACAACCGC GGAATTAGGA
TGGGCCCCGA ATATTCCTCT TGCTCAGGGA ATACGGGACA CAATTACCTG GTACACCAAT
AACCGTGCCT GGTGGCAGGA GGCTAAAGCG GCCACAGAAC AGCGCTATCG TGCTCGTGGC
CAATGA
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| Protein sequence | MRVLVTGGAG FIGTNFVLWL LHTVPDVRVT VLDAMTSAVM TNNFIYARRG SREDSVWDHF
EFVRGDVRDR DVLFPLVKDS DVVVHLAAES HNDWSLENPD LFVDTNVMGT LAVLEAVRHY
GVRLHHVSTD EVFGDLPLDS GVFTATSPYR PSSPYSASKA GADHLVRAWT RSFDLPVTLS
IASNNYGPYQ HIEKFIPRQV TELLEGRPMR LYGSGVHVRD WIHVSDHCRA LWAIVTGGEL
GKTYLIGGAC EVSNSDIAAL VLDQGTWSLP ASEAVVHVAD RPGHDVRYAL DSRETTAELG
WAPNIPLAQG IRDTITWYTN NRAWWQEAKA ATEQRYRARG Q
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