| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1799 |
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| Symbol | |
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| ID | 8380963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1965227 |
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| End bp | 1966903 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645004553 |
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| Product | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin |
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| Protein accession | YP_003161745 |
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| Protein GI | 256833018 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.295966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGAGC GCCACGCGGG AACCACCGCA CAGCAGCCTC TCACCCGACG CCAACTACGG
GAACTCGCGG AACAAGAACA GCGCGCTCAG GCATCGTTGC CAACGCCAAC TAATGGGAGC
ACAACACCAG CCGCAACCCG TAGCTCTCGG CGGGCATCAG CAGCAAGTCC AACAAGCCCT
GCACCGCGGC CACGGGTGTC CGAGGTGCCA ACATCACGTC AACCGCTCAC ACGTGCCCAA
CTGCGTGCAC TCGAGAACGC GCAACGGAGC AACGAGAGCA CCACACCCCC CGCCCCACAG
CCGCCAGCGG ATTCCCACTC AAGTCCAGCG CTCGCTGAAC TTCAGGCACT TGCGGCACAA
ACTGCGTCCG CACCGCTCAA CGCCCCCAAA GCCAGCGCCC CCAGCGTGCC CACCCCACAC
CAACCACGCG CTACTGCGCG CACACGGCGC GCACGTGCAG TGCAAGCGAC AGCTGCGAGC
CCAGCCAGCA GCATCACCCC AGCACCAAGC ACGACACTTG TGCGGGACAA AGAACTCCCC
GCCCACCCGT CAGCAGCGAC TCCTGCACCC GCGGTGGACC CATCCGTCGC CAACATTCTT
GCTGAAGTCA ACGCAGTTGT CGCGCGAGTG GAAGCAGCAC TCGTTGCACC CAACCCTCAC
CCCACACAAT CGGTGTTGAT CCTTGGATCT GGGCGTTCCG CGGCAACCCC AACCTCAGCC
CCCAGTGCTT CCTCACCGCT TTCCGCTCCC GCTCCCTCGT TCTTATCTGT TGTCACTCCA
CAGACAGCGC GTTCAGCAAC AAGCCCCCAC GGTGCGTTGA CTTCTGATGC GCAATGCCAC
CAACCAGTAC GCTCGGCGGT GTCTCCCGCA ATTGCGCAAC CCCACGGACA CCTCCCACTG
GATGACCTCC TCGCCCCCAG TAGTTCAGTG GGGGCTGAGA AACGCCAAAT CAGTCGGGAA
CGGTCCGAAC GAACTGCGTC TGGTTCACAA CGGTGGATGT CACGGTTCGC AGTCCTCGGA
TCGATCGCTG CGGCGACTAT CGCTGCTCCT ATTCTCATGG GCGGGACGCA GACAGACGCC
CCCATTTTCG CGGATGCACA ACCAGTCGAA TACGACGGCC CTAACACGGT CGACGTCGTG
GCAGCAGGGG CGACAACCAC CGACGTGCCC GCAGGCATTG CACAATCTGT CTCTGAAGAT
CAACGCGCAT ACCTTGTTGC CTCACGCTCT GAACAACGTG AAGTCCTTGA AGGATGCGAG
TCCGGTGTGC GGCCCGCTGG TACCAACGGT CAGCTCGCCA CATCAGACCT TTGCCGCGTG
ATGAACAACC AGTACCTCCG CGCGGATGCC GCTATCGCTT TGGCCGCGCT GAATGAGCAA
TACCAAGCGC GGTTTGGCCA CGCCATGTGT GTCACCGACG GATACCGCAC CCTCAGCACC
CAATACACCC TGAAAGCAAC AAAAGGGTCA CTGGCTGCGA CCCCAGGTAC GTCTAACCAC
GGGTGGGGCC TCGCGATCGA CATATGCCCT GACACCTACC AAGCCTGGGA TAAATGGAAC
TGGCTGAAAG AGAACGCCCC CACATACGGC TGGGCGCAAC CTGGCTGGGC GTCACGGTCC
TATGAACCAT GGCACTGGGA ATACACAGCG GGTGTCGAAG AAATGGCCTC ACGGTAA
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| Protein sequence | MEERHAGTTA QQPLTRRQLR ELAEQEQRAQ ASLPTPTNGS TTPAATRSSR RASAASPTSP
APRPRVSEVP TSRQPLTRAQ LRALENAQRS NESTTPPAPQ PPADSHSSPA LAELQALAAQ
TASAPLNAPK ASAPSVPTPH QPRATARTRR ARAVQATAAS PASSITPAPS TTLVRDKELP
AHPSAATPAP AVDPSVANIL AEVNAVVARV EAALVAPNPH PTQSVLILGS GRSAATPTSA
PSASSPLSAP APSFLSVVTP QTARSATSPH GALTSDAQCH QPVRSAVSPA IAQPHGHLPL
DDLLAPSSSV GAEKRQISRE RSERTASGSQ RWMSRFAVLG SIAAATIAAP ILMGGTQTDA
PIFADAQPVE YDGPNTVDVV AAGATTTDVP AGIAQSVSED QRAYLVASRS EQREVLEGCE
SGVRPAGTNG QLATSDLCRV MNNQYLRADA AIALAALNEQ YQARFGHAMC VTDGYRTLST
QYTLKATKGS LAATPGTSNH GWGLAIDICP DTYQAWDKWN WLKENAPTYG WAQPGWASRS
YEPWHWEYTA GVEEMASR
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