Gene Jden_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1797 
Symbol 
ID8380961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1961406 
End bp1961969 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content58% 
IMG OID645004551 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003161743 
Protein GI256833016 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.109893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCCA AAACGACAGC TGACGGTGGA CAGAACGACC ATCACCACCC CCACCTCACC 
AGCGATGGCC CAACGAACCA ACTCAAAGAC ACCAGGGACC ACGTTCTCAC CGAACTTGTT
CGCCTTGTCC TTGAATGGAC GACGCCTGCA ATGTTTCAGA GGTTCGCACA GGAAGCGGAC
GTGCCTCTTG ACCCTGCTGA CATTTCCCAC TTCTATTTGT TGGCACAGTA CGGTCGGATG
CACCCCAGTG AACTTGCTGC ACGCCGCGGC ATTGGGGCCT CAGCCGTGTC GAAACTCATT
GGCCGTTTGA CCGAGGTCGG TTACGTGCGC CGTGAACCAG ACCCGGCGGA CCGTAGAGCG
ACCTACATCG TCCTGACAGA TGATGGGCAG GCTGCGGCGC AGCGATTCCT TGCCCATTCT
GAAGAGCTCA TGGACCAGGT TGTTGATGGG TGGACAGACG AGGAACTCAC CACATTTGCC
GCACTGACCT GCAGGATCTC TCGGAGATGG GAAGAATACT CACGAGGTGC GCGGATGCCT
GACAACGACG AGGAACGCTC TTAG
 
Protein sequence
MHPKTTADGG QNDHHHPHLT SDGPTNQLKD TRDHVLTELV RLVLEWTTPA MFQRFAQEAD 
VPLDPADISH FYLLAQYGRM HPSELAARRG IGASAVSKLI GRLTEVGYVR REPDPADRRA
TYIVLTDDGQ AAAQRFLAHS EELMDQVVDG WTDEELTTFA ALTCRISRRW EEYSRGARMP
DNDEERS