Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1794 |
Symbol | |
ID | 8380958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1958174 |
End bp | 1958848 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645004547 |
Product | GntR domain protein |
Protein accession | YP_003161740 |
Protein GI | 256833013 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.126744 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAC GTTCTAACCT CATCGATCAA GCAGTCGCCG CACTGCGCGC CCGGATCCGC TCCGGAGAAT GGGCCGTCGG AGAACGCATC CCCACCGAAC CCGACCTCAC CCAACTACTC GGGGTAGGAC GCAATACCGT CCGCGAAGCC GTCCAAGCAC TTGTCCACGC GGGACTACTT GTGCGTCGGC AAGGATCCGG CACCTACGTT CGCTCCACCT CTGAAATGTC CCAAGCCATG GGCCGACACC TCGAAGACGC CAACTACCAA CACATTCTCG AAGTACGCCG CTCCCTGGAA GTCGAAGCTG CACGACTGGC CGCCACCCGC CGCACCGACA CAGACATCGA CAACTTGCGC GCCTCGAACG CAGCCCGCCA AGACGCCTTC GCTTCTGGTG ACGTGGACTC CATGGTTCGC GCAGACGTCA CCTTACACTT TGCTGTCGCC CAGGCCGCCC ACAACCCAGT CCTCGCGTCG CTCTACGAAG GGCTACTCGA AGCCGTCAGC CAAAACATCC GCCGCAACGT CGAACACATA GTGTCCGCCC ACACCGAAGA CGACCACGAC GGACTCGTCG AAGCCATCAT CCTCGGAGAC CAGTACCTGG CAATGACCGA AATGGCCAGC TACATCGACC ACTACATTGA GAGACGCGAC ACATCCGCCA CCTGA
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Protein sequence | MSQRSNLIDQ AVAALRARIR SGEWAVGERI PTEPDLTQLL GVGRNTVREA VQALVHAGLL VRRQGSGTYV RSTSEMSQAM GRHLEDANYQ HILEVRRSLE VEAARLAATR RTDTDIDNLR ASNAARQDAF ASGDVDSMVR ADVTLHFAVA QAAHNPVLAS LYEGLLEAVS QNIRRNVEHI VSAHTEDDHD GLVEAIILGD QYLAMTEMAS YIDHYIERRD TSAT
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