Gene Jden_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1794 
Symbol 
ID8380958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1958174 
End bp1958848 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID645004547 
ProductGntR domain protein 
Protein accessionYP_003161740 
Protein GI256833013 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.126744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAC GTTCTAACCT CATCGATCAA GCAGTCGCCG CACTGCGCGC CCGGATCCGC 
TCCGGAGAAT GGGCCGTCGG AGAACGCATC CCCACCGAAC CCGACCTCAC CCAACTACTC
GGGGTAGGAC GCAATACCGT CCGCGAAGCC GTCCAAGCAC TTGTCCACGC GGGACTACTT
GTGCGTCGGC AAGGATCCGG CACCTACGTT CGCTCCACCT CTGAAATGTC CCAAGCCATG
GGCCGACACC TCGAAGACGC CAACTACCAA CACATTCTCG AAGTACGCCG CTCCCTGGAA
GTCGAAGCTG CACGACTGGC CGCCACCCGC CGCACCGACA CAGACATCGA CAACTTGCGC
GCCTCGAACG CAGCCCGCCA AGACGCCTTC GCTTCTGGTG ACGTGGACTC CATGGTTCGC
GCAGACGTCA CCTTACACTT TGCTGTCGCC CAGGCCGCCC ACAACCCAGT CCTCGCGTCG
CTCTACGAAG GGCTACTCGA AGCCGTCAGC CAAAACATCC GCCGCAACGT CGAACACATA
GTGTCCGCCC ACACCGAAGA CGACCACGAC GGACTCGTCG AAGCCATCAT CCTCGGAGAC
CAGTACCTGG CAATGACCGA AATGGCCAGC TACATCGACC ACTACATTGA GAGACGCGAC
ACATCCGCCA CCTGA
 
Protein sequence
MSQRSNLIDQ AVAALRARIR SGEWAVGERI PTEPDLTQLL GVGRNTVREA VQALVHAGLL 
VRRQGSGTYV RSTSEMSQAM GRHLEDANYQ HILEVRRSLE VEAARLAATR RTDTDIDNLR
ASNAARQDAF ASGDVDSMVR ADVTLHFAVA QAAHNPVLAS LYEGLLEAVS QNIRRNVEHI
VSAHTEDDHD GLVEAIILGD QYLAMTEMAS YIDHYIERRD TSAT