Gene Jden_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1743 
Symbol 
ID8380909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1893059 
End bp1893634 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content61% 
IMG OID645004498 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003161691 
Protein GI256832964 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGA TCACCGCTCC CACCGTCGCC GAGCACCGCG CCTCGCAACG CGAAGCTCTC 
ATAATTGCCG GCGAAAACAT CCTGCGATCC GGTGGCTTGG CGAAGTTCTC GCCGACCAGT
GTGAGCGAAC GCGCTGGCAT CGCACGTTCG AGCTTCTACG ACTATTTTCC CTCCAAGGAT
GACCTCCTGG TCTCGATCGC CATCAGCGCA ATGGAGCGCT GGGATGCCGA GATTGAAGAG
GAGTTGCATG CCGTTGAGCC CGGGACTGCC GAGCTTCAGG CCTTCGTCGC TGCAACGATG
CGCATGACTG CTGACGGCGA GCATGAGATT GCGGCGATCG TGAGAGAGGC CGATCTCACT
CCGAGCAAGG TCGACGAGCT CATGGCCCTC CACGACGCGC TATTCAGGCC GGTGATCCGC
GTACTCACCG GCCTCGGCAT GGACTCCTCG CAAACCTCAA TCATCCTCAT CCACGGCGTC
CTCAACGCTG GGGTCCAACT GGTCGCGCAC GGCGTCGACC ACGAGCAAGT TGCCGCCGAC
GTTTTTCGGC TCCTCACACA GGGGCTCATC ACCTGA
 
Protein sequence
MPKITAPTVA EHRASQREAL IIAGENILRS GGLAKFSPTS VSERAGIARS SFYDYFPSKD 
DLLVSIAISA MERWDAEIEE ELHAVEPGTA ELQAFVAATM RMTADGEHEI AAIVREADLT
PSKVDELMAL HDALFRPVIR VLTGLGMDSS QTSIILIHGV LNAGVQLVAH GVDHEQVAAD
VFRLLTQGLI T