| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1726 |
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| Symbol | |
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| ID | 8380893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1872333 |
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| End bp | 1874579 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004482 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_003161675 |
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| Protein GI | 256832948 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTT TGCCCGCTGG TCCGTTACGT GTCCCTCTTC CTCCTCTTGG TGTGCGCCCT
CGTGAGGGTG GGATTGATGT TGCTGTGCAT GCTGCGTATG CGACCTCTGT TGATGTGTGT
CTTCTTTTTC CTGGTGATAA GGCTGAGGAG GGACGGTGGC CTTATGAGGA GGTTCGGCAC
CCGTTGACGG CCTCGTCGTA TGGGGTGTGG TGGGGTTTTA TCCCTGATGT GCCGGTGGGT
ACGCGTTATG GGTTTCGGGT TCACGGTGAG TGGAATCCTC GGTTGGGGTT GCGGCACAAC
CCGGCGAAGT TGTTGGTGGA CCCGTATGCG CGTGGGCTCG TGGGTGAGTT GTCGTATGAC
GAGTCGACCT ATGGGTACAT GATGAAGTTT GCTGACGGGC ACCGGTTGGA TGGCAATATT
CATGGTTTAG CGGACCCTCG GGATACGGCG CCGCTTGTTC CGCATGGGGT TGTGGTGGAT
GTTCCTGATG CGCCTGTTGT GGCGCGGCCG CATGTTCCGT GGGCGCAGAC TGTGGTGTAT
GAGGCGCATG TGCGTGGTGT GACGATGCGC CACCCGGATC TTCCACCGCA GTTGCGTGGG
ACGTATGCCG GGTTGGGGCA TGAGGTGATG GTGTCGTACT TGAAGGACCT GGGGGTGACG
ACGGTTGAGT TGCTGCCAAT TCAGGCTTTT GTGTCGGAGC CGCACCTCAT TGAGAAAGGG
CTGACGAATT ATTGGGGTTA TAACACTCTG GGGTTTTTTG CTCCGCACGC GGATTATGCG
ACGGCAGCTG CAAAGGAGGC TGGGCCGGAC GGGGTGATCC GTGAGGTTCA GGAGATGGTG
GCGTCGTTGC ACCGGGCGGG CCTAGAGGTG ATTCTTGACG TGGTGTACAA CCACACCTGT
GAGGGTGGTA CTGGGGGGCA GCACCTGTCC TGGCGCGGGT TGGATGCACC GGGGTATTAC
TTGCACGATG GGTCCACCCC AGCGCAGTTC GCTGATGTCA CTGGGTGTGG GAACACTCTT
GATTTCACGC ATCCGCGCGT TGTGCAACTT GCGTTGGATT CGATGCGGTA TTGGGTGACG
ACTTTTGGGG TGGATGGGTT CCGGCTTGAT TTAGCGGTGA CCTTAGGGCG CGATAGCGCC
GGTTTTACCC CTGATCACCC TTTCTTGGTT GCGTTGCGTA CTGATCCGGT GCTTTCTCAG
GTGAAGATTA TTGCCGAGCC GTGGGATGTG GGGCCGGGCG GGTGGCAAAC CGGGAACTTT
GGCGCCCCTT TTGCGGAGTG GAACGACCGC TACCGAAACT GTGTTCGCGG GTTTTGGCTG
TCTGACGCCC GGTCACTGTC CCATGGGCAT CACGCAGGTG GCGTCCGTGA ACTAGCGACC
CGGTTGGCGG GGTCAGCCGA CCTTTTTGGG CATTCTGACC CTCCGCTCAT GCGGGGCGCA
GTGGCGTCAG TGAACTTTGT GACTGCGCAC GACGGCTTTA CTGTCGCGGA TTTGGTGGCA
TACGACCACA AACATAATGA GAAGAACGGT GAGAACAACC GTGATGGCAA CAATGACAAC
CAGTCGTGGA ACCACGGTGT GGAGGGGCCT GTTGACCCTG ATGATGCCCA TGTGATTGCC
TCGTTGCGTC GCCGGTCGAT GCGCAACTTG TTGGGGACCC TTCTGCTGTC CGCGGGTACC
CCTATGCTGA CCGCTGGTGA CGAGCGTGGC CGCACCCAGC ACGGCAACAA CAACGCCTAC
TGCCAAGACA ATGAGGTGTC ATGGCTTGAG TGGGAGCCCA ACCAATGGCG TGATGACCTG
CATGCCACTG TCCGTCACTT GCTGTCGATG CGCGCGCAAC TACCAGCACT GCGCATCGAT
GGGTTCTTTT CTGGTGGGCC GCTAGCCCAC GATGATGACC ACCAACCAGA CCTCGGGTGG
TATTCCAGCG ACGGCACTCC ACTACGCCAT GAGCAATGGC ACGACCCTGG GACACGGGTT
GTGCAAATGT TCCGCCGAGG GCGTATCCCA GGATATGGAC CAGACACTGA TCCCCATGTT
CTTGTCATCA TTAACGGAAC GCTCGATTCA GCAGCTGTCA CCCTGCCTGT ACACAATACT
GAACGGCGAT GGAAACTCCA GTGGTCCTCG GAATGGGAAT CACCGACTTC CGGTGACGAC
ACGCGCGAAG AAGCGCACGG ACCTGGCGAC AATGTTGTAC TCGAAGCGCT CAGTCTTGCT
GTCTACACCG CTGATGCGCT GGGATAA
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| Protein sequence | MSALPAGPLR VPLPPLGVRP REGGIDVAVH AAYATSVDVC LLFPGDKAEE GRWPYEEVRH
PLTASSYGVW WGFIPDVPVG TRYGFRVHGE WNPRLGLRHN PAKLLVDPYA RGLVGELSYD
ESTYGYMMKF ADGHRLDGNI HGLADPRDTA PLVPHGVVVD VPDAPVVARP HVPWAQTVVY
EAHVRGVTMR HPDLPPQLRG TYAGLGHEVM VSYLKDLGVT TVELLPIQAF VSEPHLIEKG
LTNYWGYNTL GFFAPHADYA TAAAKEAGPD GVIREVQEMV ASLHRAGLEV ILDVVYNHTC
EGGTGGQHLS WRGLDAPGYY LHDGSTPAQF ADVTGCGNTL DFTHPRVVQL ALDSMRYWVT
TFGVDGFRLD LAVTLGRDSA GFTPDHPFLV ALRTDPVLSQ VKIIAEPWDV GPGGWQTGNF
GAPFAEWNDR YRNCVRGFWL SDARSLSHGH HAGGVRELAT RLAGSADLFG HSDPPLMRGA
VASVNFVTAH DGFTVADLVA YDHKHNEKNG ENNRDGNNDN QSWNHGVEGP VDPDDAHVIA
SLRRRSMRNL LGTLLLSAGT PMLTAGDERG RTQHGNNNAY CQDNEVSWLE WEPNQWRDDL
HATVRHLLSM RAQLPALRID GFFSGGPLAH DDDHQPDLGW YSSDGTPLRH EQWHDPGTRV
VQMFRRGRIP GYGPDTDPHV LVIINGTLDS AAVTLPVHNT ERRWKLQWSS EWESPTSGDD
TREEAHGPGD NVVLEALSLA VYTADALG
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