| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1699 |
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| Symbol | |
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| ID | 8380866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1833771 |
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| End bp | 1834532 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004451 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_003161648 |
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| Protein GI | 256832921 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.021514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCC ACACACCCCA CCCGCAGTAC CGTGTTCCCC TCACCACTGT GAGCACCCGC
ATCGACAATG CTGCCCACAC CGCCCACCGC AACCCGGCTG ACATCACCCT GCTCCTGGCC
ACCAAAACCC AACCCACACC CACAATCACC GATGCGATCC ACACCTACCG GCACCTAGTC
ACCACCCAGC AAATCACCAA CCGCCCCTTA GCCATAGGCG AAAACCGGGT CCAGGAACTC
AGCAATAAAG CCGCCGACCT CAGTTCCCTG CGACTCTCTG CACACCTGAT TGGGCCGCTG
CAATCCAACA AAATCAACCA CACCCTCACC GCACTGGCCC ACCACGCCGA CGCGTGGGTT
GACAGTGTGA GCACCCCACA ACTAGCCACC AAACTCAACG ACCGCTGGTC CCACACCCAC
CCACTCAACG TGCTCATCCA AATCAACGTC TCCGGTGCCC CCACCCAACA CGGTTGCCCC
CCTAGCGACG CACTCACCCT GGCCAACCAC ATTCACACAC TCCCCCACCT CCAGTTACGG
GGATTCATGG CAATCGGGCC CCGCACCACC GACCAAACCC TTCTACGCGA CAGCTACCAC
AGTGTTGCCG CCATCCGTGA TGCCGCGCTC GCCGAGGGAC ACAAGCACGC CACACACCTC
TCCATGGGGA TGAGTAACGA CCTTGACATT GCCGTCGAAT GTGGCGCAAC AATTGTCCGA
GTCGGGACTG CCGTGTTCGG TGCACGACCC TCACTGGCAT AA
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| Protein sequence | MPAHTPHPQY RVPLTTVSTR IDNAAHTAHR NPADITLLLA TKTQPTPTIT DAIHTYRHLV
TTQQITNRPL AIGENRVQEL SNKAADLSSL RLSAHLIGPL QSNKINHTLT ALAHHADAWV
DSVSTPQLAT KLNDRWSHTH PLNVLIQINV SGAPTQHGCP PSDALTLANH IHTLPHLQLR
GFMAIGPRTT DQTLLRDSYH SVAAIRDAAL AEGHKHATHL SMGMSNDLDI AVECGATIVR
VGTAVFGARP SLA
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