| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1622 |
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| Symbol | |
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| ID | 8380791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1747801 |
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| End bp | 1749912 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004372 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003161573 |
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| Protein GI | 256832846 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.372812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA CCAGGCGGGC GGCTCTCGCC GCCTGTGCAG CGGGGATACT AGCTCTCACA
ACGTTGATCC ATCCCGCATC CGCAGTTGAA AAACCACCAG CACCAGGTTT CCGGGACGTC
ACCGTCCACG ACCCCTCTGT TGTGACCTCT GGGTCACACA TCTGGGTGTT CGGATCCCAC
GGCGCATCAG CCCACACCCA AGATCTCCTC AACTGGACGC AACACACAGT TGACCTGAGC
CAGAACAGCA ACAACACGCT GTTCACCAAC CTTCGAACCG AACTCAAAGA AGCACTGGAC
TGGGCGGAAA CTGACACCCT CTGGGCATCC GACGTCATCC AATTGCCCAA CGGCAAATTC
GCGATGTACT ACAACGCCTG CAAAGGCGAC TCACCCAGGT CCGCACTCGG CCTGGCAATC
GCAGACACAG TGGATGGCCC CTACAAAGAC CAAGGCATCC TGCTGAAATC GGGAATGTGG
GATGAGGAAT CTGAAAATCC CGGCGAGATC TATGACGCGT TGATCCACCC CAACGCTGTT
GACCCTGACG CGTTCTACGA CGAAGACGGC ACCCTGTGGA TGGTGTACGG CTCCTACTCG
GGTGGAATCT TCATTGTGAA AATGGATTCC GCTACCGGGA AACCTGTTTC TGGCCAAGGG
TACGGGACCC ACCTCATGGG CGGAAATCAC TCACGAATCG AAGCGCCCGC TATCCAATAC
AACAAGGACA CCGGCTACTA CTACCTGTAC ACGTCCTTTG GCGGGTTAGA CGCCACCGGT
GGGTACAACA TGCGTGTAGC CAGGTCAAAG AACCCCAACG GCCCCTACGT GGATGCCAAG
GGAACGGTCA TGTCCACGGT GAAGTCCAAC CCGTCACGCC CCCTGTTTGA TGACGCAAGC
ATTGCACCAC ACGGGGTGAA GCTCATGGGC TCGCACGTTT TCACACGCGA ATCCGGGTCC
CCCGGAAGCG GGTCAGGGGT TGGTTACGTG TCCCCTGGAC ACAACAGCTG GTACCAAGAC
CCAAAAACCG GGAAAATGTT CCTCATTTTC CACTCCCGTT TCCCGGACAC CGGAGAAATG
CACCAGATGC GTGTGCAACA AATGTGGTTC AACAAGGATG GTTGGCCGGT GTTGTCCCCG
ATGCGCTATG CAGGGGAGAC AACGGAACGA ACAGTCTCTG AACATGTCGT TGGCACCTGG
CAGTTGATCA ACCACGGCAC AGACATCAAC ACCACTGCCA CAAAGTCGTC GACCTACACC
TTCCGCTCAG GTGGAACTAT CACCAGCGGG ACAGGAACAA CAAGCGTGGG AAGTTGGCGA
ATCACCTCAC GCAATACCGC TGACATCACT CTCGCTGGAA CAACATACAA CGGCGTGTAC
ACCCCAGTTT TTGACCCGCA ATACAACTCC TGGAGTTACG GGTTTACCGC ACTATCCAGC
ACCGGAACAG CCCTTATGGG ACGCAACATC AGTCTCGCAG CGCGCAGCGC ATCGACACCA
GATGGGGCTT GGTCTTTTGA GGGCAACCTC AACGACGCGT CCGGCCAATC AGCGACAGCC
ACCACCACTG GCAACCGACT CGGCACCGCA GGCACAGCCC CGACCTACAC CACCGGAATC
CACGGACGCG CCATCCAATT GAACGGAAGT AACGGGGTTG TACTCCCCCA AGGGCTCATC
CATGGGAACC GTTACACCGT GTCCATGTGG ATCAAACCCG AACAACTCAC CGAGCACACA
CCAGCATTTT TTGGTGCAGC ATCCACTGAA CAGTGGGTTT CTTTGGTCCC ACGTGGCAAC
GCAGCAGCTC AAGGCAATGC CATGGTGTGG TCTGGTACCC AGTGGTATGA CGCCCCCACC
ACAACCAGCC CACCACTGAA CCAGTGGACG CACCTTGCCT ACGTCGTCAA TAACGGCACT
GCACAGGTGT TCGTCAATGG GAGCCGTGCC TACAACGGCA CCGGCTTCCC CAACGTGTTC
ACCTCAACCA ACGCTACCTT TGCTCTTGGA GTGAACTACT GGGACACCCC CTTCAGTGGA
GCAATCGATG AGGTGAAGGT CTGGCGCACA GCCCTCACCG CATCGGACAT CAGCGCACTC
GCCGCACGAT AA
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| Protein sequence | MKATRRAALA ACAAGILALT TLIHPASAVE KPPAPGFRDV TVHDPSVVTS GSHIWVFGSH
GASAHTQDLL NWTQHTVDLS QNSNNTLFTN LRTELKEALD WAETDTLWAS DVIQLPNGKF
AMYYNACKGD SPRSALGLAI ADTVDGPYKD QGILLKSGMW DEESENPGEI YDALIHPNAV
DPDAFYDEDG TLWMVYGSYS GGIFIVKMDS ATGKPVSGQG YGTHLMGGNH SRIEAPAIQY
NKDTGYYYLY TSFGGLDATG GYNMRVARSK NPNGPYVDAK GTVMSTVKSN PSRPLFDDAS
IAPHGVKLMG SHVFTRESGS PGSGSGVGYV SPGHNSWYQD PKTGKMFLIF HSRFPDTGEM
HQMRVQQMWF NKDGWPVLSP MRYAGETTER TVSEHVVGTW QLINHGTDIN TTATKSSTYT
FRSGGTITSG TGTTSVGSWR ITSRNTADIT LAGTTYNGVY TPVFDPQYNS WSYGFTALSS
TGTALMGRNI SLAARSASTP DGAWSFEGNL NDASGQSATA TTTGNRLGTA GTAPTYTTGI
HGRAIQLNGS NGVVLPQGLI HGNRYTVSMW IKPEQLTEHT PAFFGAASTE QWVSLVPRGN
AAAQGNAMVW SGTQWYDAPT TTSPPLNQWT HLAYVVNNGT AQVFVNGSRA YNGTGFPNVF
TSTNATFALG VNYWDTPFSG AIDEVKVWRT ALTASDISAL AAR
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