| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1597 |
|---|
| Symbol | |
|---|
| ID | 8380766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1719460 |
|---|
| End bp | 1721313 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645004347 |
|---|
| Product | GTP-binding protein HSR1-related |
|---|
| Protein accession | YP_003161548 |
|---|
| Protein GI | 256832821 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTGC TGCTCGGCCA CCCCAACGTG GGGAAATCCA CCCTCTTCAA CGCACTGACC
GGGTCCCGAC AAAAAACCAT GAACGCCCCA CGCACCACCG TCACCATGGA ACGCGGAACC
TGGACAATAG GCGACCGCCA CACACTCGAG ATTGTTGACC TGCCAGGAAC CTACTCCTTG
GCAGCCCAAT CACCCGACGA AGAAGTTGCC GCCGCCGAAG TCGACGCACT CGTGCAACGG
GCAGGACACG ACGACCTTGT CATTGTTGTT CTCGACGCCA CCGCACTTGC CTCATCGCTC
TACATGCTTC GTCAAGTTCA ACGCCGCGGT GTGCGCGTTG TAGCTGCCCT GACCCTTGCA
GACGTTGCCG CTGATCGTGG CTCCACAGTG GACACCGACC GCCTTTCAGT CCTCATCGAC
GCGCCCGTGG TTGTCCTCAA TCCGCGACTC CGCCACGGCA CAAACGACCT GCGAGACGCG
GTCAGTGCAG CCCTTGCAGA ACCTCACCCG GTCGCGCTAG CACAACACGA GGACAGCGCT
GACACCTTCG ACTGGGTAGC CCGCGTCATC CACGAGGTCG AAACCGCACG TGACCACGCA
CCAACCCGCA GCGACCTCAT TGACTCGGTG CTGCTCCGCC CCTGGGTCGG TATCCCCGTG
TTCCTCGCGG TCCTGTGGGC GACCTTCCAA CTGACCACAA CCATCGCAGG CCCCATCCAA
GACCTCTTCG AGTCGGTGAT CACAGGCCCC GTGACCTCGA TGATCCTGGC AGCAACCGGC
ACGCTGACCG CCCCAGCATG GGTTGACTCA CTCCTCGTTG ATGGGCTTCT CGCCGGGGTA
GGAACCGTGG TGAGCTTCCT GCCCCTCATG GTCATCATCT TTGTCCTCAT CTACCTGCTA
GAAGACTCCG GCTACCTCGC CAGAGTTGCC GTCATGGGTA ACCACGCGAT GCAGAAAATC
GGCCTCGACG GCCGGTCGAT CTTGCCCTTA GTGATTGGCT TTGGCTGTAA CGTTCCCGCC
CTCAGCGCCA CCAAAACAAT TCCCGATGCG CGCCACCGGC TCCTCACCGG CTTGCTGATC
CCGTTCTCTT CCTGTACCGC ACGCCTTGTG ATTTACCTGT TCCTCGCCTC CGCGTTCTTC
CCCGGCCACG CCGGACTAGT GGTGTTAGGC ATGTACATTG CCTCAGCACT TGTCATCATT
GGTGGTGCGC TACTTCTGTC CCGAACCGCA TTTCGATCCG GCTCACATCA ACCACTCCTC
CTCGTGTTGC CGGCTTACCA AACACCCCGG ATCGCCCCCT TGGCACACGC CGTTCTCCTG
CGGTGTAAAG CCTTCATCCA ACGCGCCGGT GTGGTGATCT TGTCTCTGTC CCTTGGCGTG
TGGGTCCTGA TAGCGATCCC CGCACACAGC GGTTACGCCG TCGGTGACCC CGACCTGCCA
GCCCACGAGT CACTATTTGG CGTTGCCTCC ACCCAGATCG CCACCGTGTT CGCCCCAGCC
GGATTCGACG ATTGGCATGC TGGAGCAGCC CTCATCACCG GGTTCGTTGC CAAAGAAGCG
GTCGTGGGAA CATTCGCCAC CACCTATGGG CTCGAAGAAC CCGACAACCC CGCTGACGCT
GGGGACCTCG GTGCCCGCCT ACGGACAACG TTTGACCAAT CATCGGGGGG ACACCCTGAA
GCTGCAGCAC TCGCGTTCAT GGTGTTCTGC CTGGTTTACA CACCGTGCCT GGTCACAGTT
GCGGAACAGC GGCGCCTCTT CGGTGGGCGG ATCACCACCG TGGCCGTGGT GGCCTCAATG
ATCGTGGCTT GGCTCTTAGC GGTCGTGGTC TTTCAGGTTG GTCGGCTGCT ATGA
|
|---|
| Protein sequence | MILLLGHPNV GKSTLFNALT GSRQKTMNAP RTTVTMERGT WTIGDRHTLE IVDLPGTYSL
AAQSPDEEVA AAEVDALVQR AGHDDLVIVV LDATALASSL YMLRQVQRRG VRVVAALTLA
DVAADRGSTV DTDRLSVLID APVVVLNPRL RHGTNDLRDA VSAALAEPHP VALAQHEDSA
DTFDWVARVI HEVETARDHA PTRSDLIDSV LLRPWVGIPV FLAVLWATFQ LTTTIAGPIQ
DLFESVITGP VTSMILAATG TLTAPAWVDS LLVDGLLAGV GTVVSFLPLM VIIFVLIYLL
EDSGYLARVA VMGNHAMQKI GLDGRSILPL VIGFGCNVPA LSATKTIPDA RHRLLTGLLI
PFSSCTARLV IYLFLASAFF PGHAGLVVLG MYIASALVII GGALLLSRTA FRSGSHQPLL
LVLPAYQTPR IAPLAHAVLL RCKAFIQRAG VVILSLSLGV WVLIAIPAHS GYAVGDPDLP
AHESLFGVAS TQIATVFAPA GFDDWHAGAA LITGFVAKEA VVGTFATTYG LEEPDNPADA
GDLGARLRTT FDQSSGGHPE AAALAFMVFC LVYTPCLVTV AEQRRLFGGR ITTVAVVASM
IVAWLLAVVV FQVGRLL
|
|---|
| |