| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1592 |
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| Symbol | |
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| ID | 8380761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1716466 |
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| End bp | 1717140 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645004342 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003161543 |
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| Protein GI | 256832816 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGATT TTCTTGACGT CATCACGACC TACAACATAC CCGCCGCATA CTGGGTCAAC
CTCAAACTTG CATTCTTCTC TACCGTTATT GCATTAACGC TTGGTTTAGT TCTTGCCATG
ATGCGTATTT CTCCGATTCC TTCACTGCGC GCTTTGGGGG CGTCCTACGT GACGCTTATG
CGAAATACCC CACTCACTGT CATCATGGTG TTCGCGGTTT TGGTGTTGTG GCCAATTTTT
GGTGTGAATT TCTCGCAGAA CTTTGCGCAG AATTTCTTTT GGCTCGCGGT GTTGTCGCTG
TCGGTGTACC ACGCGTCATT TTTCTGTGAA GCAATCCGAT CTGGGGTCAA CACGGTGCCG
GTTGGTCAAG CAGAGGCAGC ACGAGCGATC GGGCTATCTT TCCTCCCTGC AGCACGGCTA
GTCATTATGC CACAAGCGTT TCGTGGTGCT ATCGCTCCGT TAGGGAATAC GATTATTGCG
TTAATCAAAA ATACGACCGT TGCTGCGGCA GCGTCAGTGG CAGAGATCTC GATTCTCATG
CGGGAAATGA TTGAAAATAA CGGGAACTAC GTGATCCCTA TCTTCCTCAC TATTGCTGTG
GGATTCGTGG TCATTGTTAT CCCGGTGGGG ATGGCGACCA CATACTTGTC ACAAAAATTG
GCGGTGTCAC GATGA
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| Protein sequence | MADFLDVITT YNIPAAYWVN LKLAFFSTVI ALTLGLVLAM MRISPIPSLR ALGASYVTLM
RNTPLTVIMV FAVLVLWPIF GVNFSQNFAQ NFFWLAVLSL SVYHASFFCE AIRSGVNTVP
VGQAEAARAI GLSFLPAARL VIMPQAFRGA IAPLGNTIIA LIKNTTVAAA ASVAEISILM
REMIENNGNY VIPIFLTIAV GFVVIVIPVG MATTYLSQKL AVSR
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