| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1538 |
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| Symbol | |
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| ID | 8380707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1653161 |
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| End bp | 1653943 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004288 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_003161489 |
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| Protein GI | 256832762 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.713042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTCCAG TTCCCCCTCC TAGGCATCCA TCCGGTGCCT TACCTCCTGG GATCCCTGCG
CAGTTTGTGC CACAACATGT AGCAATCGTC ATGGATGGGA ATGGTCGTTG GGCTAACCAG
CGTGGGTTGC CACGTACTGA GGGGCACAAA GCTGGTGAGG TGGCCCTCCT TGACGTGGTT
GCTGGTGCCA TTGAGATGGG AATCCGTCAT GTCAGCGTGT ATGCGTTTTC CACGGAGAAT
TGGAAGCGGT CACCTGATGA GGTGCGTTTC CTCATGGGGT TCAATAAGGA GGTGTTGCGT
CGGCGTCGCG ACACGATGAA TGAGTGGGGG GTGCGGGTTC GGTGGTCGGG TCGCCGTCCC
CGGTTGTGGC CATCGGTGGT CAAGGAGTTG GAGGAAGCGG AGGCGTTAAC TCGCTCCAAT
ACTGTGTGCA CATTGAACAT GTGCGTCAAT TATGGGGGGC GTGCTGAGAT CGCCGATGCG
GCAGCTGCGT TAGCCCGTGA TGTTGCGGCA GGCAAGCTGG ACCCGAGGAA GGTTTCTGAG
AAGGTTCTCG CCCGCTATCT TGATGAACCA GATCTTCCGG ACGTGGATTT GTTTGTGCGT
AGCTCTGGTG AGCAGCGTTT CTCCAATTTT ATGTTGTGGC AGTCGGCATA CGCTGAGATG
GTCTTTCTTA ACACATTGTG GCCGGATTTT GATCGCCGAA CGTTGTGGGA AGCAGTGGGT
ATTTATGCTC GACGCGACCG GCGTTATGGT GGGGCAATTG ATGCTCCGGT GGTGGACCAG
TGA
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| Protein sequence | MTPVPPPRHP SGALPPGIPA QFVPQHVAIV MDGNGRWANQ RGLPRTEGHK AGEVALLDVV
AGAIEMGIRH VSVYAFSTEN WKRSPDEVRF LMGFNKEVLR RRRDTMNEWG VRVRWSGRRP
RLWPSVVKEL EEAEALTRSN TVCTLNMCVN YGGRAEIADA AAALARDVAA GKLDPRKVSE
KVLARYLDEP DLPDVDLFVR SSGEQRFSNF MLWQSAYAEM VFLNTLWPDF DRRTLWEAVG
IYARRDRRYG GAIDAPVVDQ
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