Gene Jden_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1535 
Symbol 
ID8380704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1651239 
End bp1652177 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content57% 
IMG OID645004285 
ProductABC-3 protein 
Protein accessionYP_003161486 
Protein GI256832759 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.428275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCT TCATTGACAT GGTCACTGAC CCCTTCATGC AGCGGTCACT TCTCGCTGCT 
GCCATTGTGG GCCTCACCGC CCCCATTATG GGGACATACC TCGTTCAACG CCGTCTGTCA
CTACTCGGCG ACGGAATCGG TCACGTCGCA CTAACCGGTG TTGCTCTAGG CTGGATGGTT
GGCTCAGCTA TGAACCTCGT CCAGCGCGAC GCCCTGGCCA TACCTGGGGC CATCGTTGCG
GCAATAGCCG GAGCACTCGC AATCGAATAC GTCCGCGAAC GCGGACGCAC TAGCGGTGAC
GTTGCCCTTG CCATGCTCTT CTACTCCGGA ATCGCTGGTG GAGTTGTCCT TATCTCCATC
GCTGGAGGAA CAAACGCAAA CCTCATGGGA TACCTTTTCG GTTCCATTAC CACGGTGACC
GACCTCGACC TTGCGATGAT CCTTGGTCTT GGCGCTCTGA TCTTCGCCGT GGGATTTGGG
TTACGTGCAG TGCTTTTTGC CGTGTCCAAC GACGAAGAGT TCGCCCGTGC CTCAGGCTTG
CCTGTGCGAA CCGCCAATAT TGCGATCGCC ATCGTGGCGG CTCTCACAGT GACCGTATCG
ATGCGCGTCG TCGGACTACT CCTCGTATCA GCCATCATGA TTGTGCCCGT GGCTGCGGCC
CAACAAGTGG CAACAACCTT TAAAAGTACG ATGCTGACCG CCATGGGAAT CGGTGTCACC
GTTGCCGTTG GCGGATTAAG TATCACCTGG GTACATCAGC TCTCACCTGG TGCAACGATT
GTCCTCCTGG CGGTTGCTGC TTATCTGCTT GCTTTGGTGG TACGCAGTTT TCTCAATAAA
CGCCACACTC CTGGTGATCC GCACCCAGAT CTCCCTGACG ACGTACAATT GTCGGCTGCA
ACACCCCAGC AAACCCGGAG CGAACCATGC AACGAATGA
 
Protein sequence
MNSFIDMVTD PFMQRSLLAA AIVGLTAPIM GTYLVQRRLS LLGDGIGHVA LTGVALGWMV 
GSAMNLVQRD ALAIPGAIVA AIAGALAIEY VRERGRTSGD VALAMLFYSG IAGGVVLISI
AGGTNANLMG YLFGSITTVT DLDLAMILGL GALIFAVGFG LRAVLFAVSN DEEFARASGL
PVRTANIAIA IVAALTVTVS MRVVGLLLVS AIMIVPVAAA QQVATTFKST MLTAMGIGVT
VAVGGLSITW VHQLSPGATI VLLAVAAYLL ALVVRSFLNK RHTPGDPHPD LPDDVQLSAA
TPQQTRSEPC NE