Gene Jden_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1534 
Symbol 
ID8380703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1650463 
End bp1651242 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content57% 
IMG OID645004284 
ProductABC transporter related 
Protein accessionYP_003161485 
Protein GI256832758 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.261317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG CACCCATCGT CTCCATCAAG GACCTCAACG TCCACCTGGG CACGAGCCAC 
ATCCTTCACT CCGTGTCGCT CGACATCACA CCTGGTGAGG TTGTCGCACT TTTGGGCACG
AATGGTTCCG GAAAATCTAC CCTGGTGCGT GCACTGACAT CCATCATCCC CTCCACATCA
GGGCGCATCG AACTGTTTGG ACACCGCCCC GGCCCCAAGG TGCCATGGCA CCGCGTGGGG
TACGTACCTC AACGCGTCAC TGCCCAGTCA GGGATCACCG CATCATCGTG CGAAGTTGTC
GCATCAGGAC TTCTATTTGG TCGTCGAATC CGCCTTCCCA AAAACGCGAT GGACCAAGCC
CACAAAGCAC TAGCTTTGGT TCACCTTGAA GATCGAGTTC ACCAGCCACT GAACTCGATG
TCCGGTGGAC AACAGCAGCG GGTCCTCATC GCGCGCGCCT TGGTCCGCAA CCCAGACCTG
CTCATCCTTG ATGAACCAGT TGCGGGTGTC GACCAGCCGT CGCAAGAGGC TTTCGCTGCG
ACCTTGACTA ACCTTGTCAA GCAAGGACGA ACAATCATCG TTGTCCTTCA CGAACTCGGA
GAACTCGAAC CGTTGATCAC CAGAACCGTT GTTCTTCGAC ACGGGCGAAT CGTCCACGAT
GGCCCTGCCT TGCGAGCAAC CACCCAACAC GCAGGTCCAG ACCATGAACA CATTCATCCC
CATGATGGGT TTGTTGAACT CAGCTCTGCC CTCCTCCCTG AGATGGGAGT GGACCAATGA
 
Protein sequence
MTEAPIVSIK DLNVHLGTSH ILHSVSLDIT PGEVVALLGT NGSGKSTLVR ALTSIIPSTS 
GRIELFGHRP GPKVPWHRVG YVPQRVTAQS GITASSCEVV ASGLLFGRRI RLPKNAMDQA
HKALALVHLE DRVHQPLNSM SGGQQQRVLI ARALVRNPDL LILDEPVAGV DQPSQEAFAA
TLTNLVKQGR TIIVVLHELG ELEPLITRTV VLRHGRIVHD GPALRATTQH AGPDHEHIHP
HDGFVELSSA LLPEMGVDQ