Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1534 |
Symbol | |
ID | 8380703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1650463 |
End bp | 1651242 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645004284 |
Product | ABC transporter related |
Protein accession | YP_003161485 |
Protein GI | 256832758 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.261317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGG CACCCATCGT CTCCATCAAG GACCTCAACG TCCACCTGGG CACGAGCCAC ATCCTTCACT CCGTGTCGCT CGACATCACA CCTGGTGAGG TTGTCGCACT TTTGGGCACG AATGGTTCCG GAAAATCTAC CCTGGTGCGT GCACTGACAT CCATCATCCC CTCCACATCA GGGCGCATCG AACTGTTTGG ACACCGCCCC GGCCCCAAGG TGCCATGGCA CCGCGTGGGG TACGTACCTC AACGCGTCAC TGCCCAGTCA GGGATCACCG CATCATCGTG CGAAGTTGTC GCATCAGGAC TTCTATTTGG TCGTCGAATC CGCCTTCCCA AAAACGCGAT GGACCAAGCC CACAAAGCAC TAGCTTTGGT TCACCTTGAA GATCGAGTTC ACCAGCCACT GAACTCGATG TCCGGTGGAC AACAGCAGCG GGTCCTCATC GCGCGCGCCT TGGTCCGCAA CCCAGACCTG CTCATCCTTG ATGAACCAGT TGCGGGTGTC GACCAGCCGT CGCAAGAGGC TTTCGCTGCG ACCTTGACTA ACCTTGTCAA GCAAGGACGA ACAATCATCG TTGTCCTTCA CGAACTCGGA GAACTCGAAC CGTTGATCAC CAGAACCGTT GTTCTTCGAC ACGGGCGAAT CGTCCACGAT GGCCCTGCCT TGCGAGCAAC CACCCAACAC GCAGGTCCAG ACCATGAACA CATTCATCCC CATGATGGGT TTGTTGAACT CAGCTCTGCC CTCCTCCCTG AGATGGGAGT GGACCAATGA
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Protein sequence | MTEAPIVSIK DLNVHLGTSH ILHSVSLDIT PGEVVALLGT NGSGKSTLVR ALTSIIPSTS GRIELFGHRP GPKVPWHRVG YVPQRVTAQS GITASSCEVV ASGLLFGRRI RLPKNAMDQA HKALALVHLE DRVHQPLNSM SGGQQQRVLI ARALVRNPDL LILDEPVAGV DQPSQEAFAA TLTNLVKQGR TIIVVLHELG ELEPLITRTV VLRHGRIVHD GPALRATTQH AGPDHEHIHP HDGFVELSSA LLPEMGVDQ
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