| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1514 |
|---|
| Symbol | |
|---|
| ID | 8380683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1626372 |
|---|
| End bp | 1627631 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645004261 |
|---|
| Product | putative transcriptional regulator, PucR family |
|---|
| Protein accession | YP_003161465 |
|---|
| Protein GI | 256832738 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2508] Regulator of polyketide synthase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0197746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGTTCG GGGCACCTGC CTGGGATGTT GTGGGAATCG CACAAGACAT GGTTATTCTC
GTGTCCATGA CATCCCCAGT GACTTCGAGC GGCGACACAG CAGGTCCTAT TCCTGCGTCT
CCTGCGAACC AGCAGCGCGT CCGTGAGGGT GCAGGTCTGC TCACATCAGC TGCATTGAAG
CGTCTTGATG AGGATCTTCC CTGGTACCGT GCGCTACCGC GGGAAGAACG ACAATGGGTT
GGGTTAGTAG CCCAACAAGG TATTACCGCG TTTATTGATT GGTACACCTC GGCGGGTAAG
TCGGGGCGTG ACCCAGGTGA GATGTTTTCT GTCGCGCCCC AAGACTTAAC CCGCTCCATT
TCGCTGCAAC ACACACTGCA AATTGTGCGG TGTGCGGTGG AAGTGGTGGA AGCCTACAGT
GACCGATTAG CTGCCCCCGG CCAAGAACGA GATTTACGTG AAGCAGTGCT GCGGTATTCA
CGTGAGGTCG CGTTTGAGGC TGCTGAGGTG TATGCGCGTG CTGCGGAAGT GCGTGGCGCG
TGGGATGCCC GGCTTGAGGC GCTGGTTGTT GATGCGATTG TGCGCGGTGA CCGAGATAAG
TCGCTTCGAT CCCGAGTGTC AACACTCGGG TGGTCAGGCA CCGGGCATGT TGTTGTCATG
GTGGGGTCAA CGGCGTCTGC CTTTGACGAC GTCAAGTCAG CAGATCTTCG CCGCGCGACC
AGGCGCATCT TTGACGACGT CCTCGTGGGG ATTCAAGGCG ACCGGCTCGT GCTTGTTCTT
GGCGGCTCCG GTGACTTAAT CGCTGCAGCA GAGTCCCTTG CCCAACGTTT TGGTCCCGGC
CCGGTCATTA TTGGCCCGGT CGTTGCTGGG CTTGACGATG CGCCTCGTAG CGCCGCTGCT
GCCCTGGCTG GTCTTGAGGC AGTGCCGGCG TGGCCTGGCG CTCCCCGTCC GGTCAGTGCA
GATGAGCTCC TTCCTGAGCG GATGCTCGTG GGCGACCCGT TGGCGCGCGC CGCCCTGGTC
ACCCAAGCGT TTGAACCGTT GTCCGCCTCG GGTGGGGCGT TACTAGAGAC CCTGTCCGCC
TACCTTGGTA CCGGCCGTTC CCTGGAGGGC GCGGCACGTG ACCTGTATGT TCACCCCAAC
ACGGTACGTT ATCGGTTGCG CAAGGTCGCG GAGTTGACGG GCTGGGATCC TCTCGATGCG
CGTGAGTCGT TTGTTCTTCA AGTCGCGTTA GCAGCGGGTC GGCTCCCCGC ACCTCATTAG
|
|---|
| Protein sequence | MGFGAPAWDV VGIAQDMVIL VSMTSPVTSS GDTAGPIPAS PANQQRVREG AGLLTSAALK
RLDEDLPWYR ALPREERQWV GLVAQQGITA FIDWYTSAGK SGRDPGEMFS VAPQDLTRSI
SLQHTLQIVR CAVEVVEAYS DRLAAPGQER DLREAVLRYS REVAFEAAEV YARAAEVRGA
WDARLEALVV DAIVRGDRDK SLRSRVSTLG WSGTGHVVVM VGSTASAFDD VKSADLRRAT
RRIFDDVLVG IQGDRLVLVL GGSGDLIAAA ESLAQRFGPG PVIIGPVVAG LDDAPRSAAA
ALAGLEAVPA WPGAPRPVSA DELLPERMLV GDPLARAALV TQAFEPLSAS GGALLETLSA
YLGTGRSLEG AARDLYVHPN TVRYRLRKVA ELTGWDPLDA RESFVLQVAL AAGRLPAPH
|
|---|
| |