Gene Jden_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1446 
Symbol 
ID8380617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand+ 
Start bp1555835 
End bp1556476 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content53% 
IMG OID645004194 
Productcytochrome c oxidase subunit III 
Protein accessionYP_003161399 
Protein GI256832672 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.190204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.245723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGACTG AAACGGCTGC TCCCAAAGCA CAACACCACG TCAGTGTGAA TCGTCCCAAC 
CCAGTGTCGG TCGGGACCAT CGTTTGGCTG TCTAGCGAAC TCATGTTCTT CGCTGGACTT 
TTTGCGATGT ACTTCACCAT TCGCGCCACA GTGCCGGCAG AACAGTGGAG TGAGGGGACG 
GGACACCTCA ACCTCACCTT TGCCATGATC AACACCGCTG TTCTTGTTGC GTCCTCATTT 
ACATGCCAGT TTGGCGTGTT CGCTGCTGAA CGCTTCCAGC CGGTTCGTAC TGGATCCTTG 
CTCCAGATCA CTAAATGGGG CATGAACGAG TGGATGACAC TCACGTTCCT CATGGGATCC 
TTCTTCGTCG CCGGACAGGT GTTCGAGTAT GCAGAACTTG TTCAACACGG ACTCACTATC 
TCCTCGAGCC CGTATGGTTC TGTGTTCTAC CTCGCCACCG GTTTCCACGG ACTTCACGTC 
CTCGGCGGTT TGATTGCGTT CCTCCTCCTC CTTGGTCGAT CCTTTTCTGC CAAGAACTTT 
GGACACCGTG AGGCAACCAC AGGCATCGTC GTGTCGTATT ACTGGCACTT CGTTGATGTT 
GTCTGGCTCG GACTGTTTTT CGTTATTTAC TTCCTGCGTT AA
 
Protein sequence
MSTETAAPKA QHHVSVNRPN PVSVGTIVWL SSELMFFAGL FAMYFTIRAT VPAEQWSEGT 
GHLNLTFAMI NTAVLVASSF TCQFGVFAAE RFQPVRTGSL LQITKWGMNE WMTLTFLMGS 
FFVAGQVFEY AELVQHGLTI SSSPYGSVFY LATGFHGLHV LGGLIAFLLL LGRSFSAKNF 
GHREATTGIV VSYYWHFVDV VWLGLFFVIY FLR