| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1365 |
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| Symbol | |
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| ID | 8380542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1462763 |
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| End bp | 1463863 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645004114 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_003161324 |
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| Protein GI | 256832597 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.462493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCA GATTTTCCCA ATGGGGTAAC GACCTCTACA CCGGGGCGCG TTCCTATGAC
GTCGTTGGCA AACGGCGTAC GTTCTTCCTC CTCGCGTTGG CAACCATCTT GATCTCTGTC
GCAATCCTTG GGATTCGTGG GCTCAACCTC GGTATCGAAT TCCGTGGTGG TTCACAGTTC
ACCTTGACGA ATGTTGACAC GAGCGACCAA ACGTCAGCAG TTGACGCTGT GACTTCAGTG
TCACCATCCG AAGTCGCACG CGTCGCGAAC GTGGGGACAA ACGCTCTCCG CGTCCAAACG
AGTGAGCTGA CAGACATTGA GGTTCAAGAG GTTCGTCAAG CTCTTGCGGA CGCCTATGGA
GTGACCGCAG ACGATGTGGC GAGTTCGTAT GTCGGGCCGA CGTGGGGCCA AGATGTGTCC
ACCAAGGCAT TCACCGGAAT CGCAGTGTTT TTGGTGTTGG TTATGCTGGT GATGTCCCTA
TACTTCCGTG CATGGCGGTC AGCTGCTGCC ACGATTCTTG CGCTCTTCCA CGACCTGATC
ATTACCCTTG GCGTGTACGC ACTGGTGGGA TGGGAAGTAT CACCGGCAAC GATCATTGGC
CTGCTGACGA TCCTTGCCTA CTCCATTTAT GACACCGTGG TGGTCTTCGA CAAGGTCCGT
GAGAATACAG ACAACCTCAA TGGGCAATAC CTGGCGACCT ACGCTGAGCG AGCAAATCTT
GCGGTGAACC AAACAATGGT GCGGTCAATC AACACGTCCG TGGTTGCGCT ACTGCCAGTT
GCCTCGATCT TGTTTATCGG AGCGTTCCTG CTGGGTGCAG GTACTTTGCG TGATATTTCC
CTAGCATTGT TTGTGGGTAT GGGAATTGGA ACGTATTCGT CGATCTTTTT GGCGACACCC
ATCCAAGTTG CTTTGCGCGA ACGCGAACCC GCTATCCGTG AGCACAACGA ACAGGTCGCA
GCGGTCCGTG AAGCACGAGC AACAGGGGCG GACCCCTCTC AAGTTGTGGG TGTGTCACTG
ACGCAGGGGG CTGACGAGAA GAACATTGTG CCAGGTGTCC GATTGGCTAA CCGTGCGCAA
CCAAAGAAAC GGAAACGCTG A
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| Protein sequence | MARRFSQWGN DLYTGARSYD VVGKRRTFFL LALATILISV AILGIRGLNL GIEFRGGSQF
TLTNVDTSDQ TSAVDAVTSV SPSEVARVAN VGTNALRVQT SELTDIEVQE VRQALADAYG
VTADDVASSY VGPTWGQDVS TKAFTGIAVF LVLVMLVMSL YFRAWRSAAA TILALFHDLI
ITLGVYALVG WEVSPATIIG LLTILAYSIY DTVVVFDKVR ENTDNLNGQY LATYAERANL
AVNQTMVRSI NTSVVALLPV ASILFIGAFL LGAGTLRDIS LALFVGMGIG TYSSIFLATP
IQVALREREP AIREHNEQVA AVREARATGA DPSQVVGVSL TQGADEKNIV PGVRLANRAQ
PKKRKR
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