Gene Jden_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1357 
Symbol 
ID8380534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1452939 
End bp1453676 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content57% 
IMG OID645004106 
ProductNUDIX hydrolase 
Protein accessionYP_003161316 
Protein GI256832589 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.266924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.583365 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG CCTATCTGTC ACGTCCCGGC AACATCTCAC CCAACATCGC ATTCCCAGAT 
CCCAACGATC GCCCCGCGGT GAGTACTGAT ATTGCCGTAC TTACCCTGAC CCCTGAACGG
GAGTTGGCGG TGGTGCTCAT TGACCTTGAC GGTCAACGTC AACTACCGGG AACGTTCATG
ATGCCTGGCG AAACACTGAA GAAGTCGGCA CGGCGTGCTC TGAGTGAGTG CCTGACGCTC
GAGGTGGGGG AGATACACCT CCTTGACGTC TTGGACGAAC CCGCACGCGA TCCACGCGGG
TGGATGTTGT CAATCTCGTT CTTCGCAGCG GTTCCATACA GTGCTGTGGA GCTTCTCCTG
GCGGAGGAGC ACGGACCAAA CCCCCCATAC CCGTTGGCTC TTGTTCCCGT GTCCGATCTG
CATGTGACAT CTTTTACGGC GAACCAGTCT CAGGTGATCG AACAAGCCGT GGACAAGATC
ACGCATGAGT ATGCTCTGCG GCCAGACCCC TACTACTTTA TTCCTGCAGA AGAGGTCACT
CTTTTTGACC TGCGCAACGT GCACGAAATT GTCCGGGGAA AGAAGATTTT GAAGGACAAC
TTCCGCAGGC GGATGACGCC TCACCTCCTC GACACTGGTC ATGTCACTCA AGGGCGATTA
GGGAAGCCGG CCAGGTTATA CCGTCGGCGC CAGGTGCGGG TGCCCCGACC ACCTGCTCAG
GAAACATCGT TAGGCTGA
 
Protein sequence
MPDAYLSRPG NISPNIAFPD PNDRPAVSTD IAVLTLTPER ELAVVLIDLD GQRQLPGTFM 
MPGETLKKSA RRALSECLTL EVGEIHLLDV LDEPARDPRG WMLSISFFAA VPYSAVELLL
AEEHGPNPPY PLALVPVSDL HVTSFTANQS QVIEQAVDKI THEYALRPDP YYFIPAEEVT
LFDLRNVHEI VRGKKILKDN FRRRMTPHLL DTGHVTQGRL GKPARLYRRR QVRVPRPPAQ
ETSLG